BLASTX nr result

ID: Coptis23_contig00030381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030381
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305238.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002327450.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08
ref|XP_003543841.1| PREDICTED: LOW QUALITY PROTEIN: probable ina...    59   4e-07
ref|NP_174039.1| putative inactive receptor kinase [Arabidopsis ...    58   7e-07
ref|XP_002890616.1| hypothetical protein ARALYDRAFT_889992 [Arab...    58   7e-07

>ref|XP_002305238.1| predicted protein [Populus trichocarpa] gi|222848202|gb|EEE85749.1|
           predicted protein [Populus trichocarpa]
          Length = 609

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/66 (48%), Positives = 46/66 (69%), Gaps = 6/66 (9%)
 Frame = -1

Query: 220 TISCLFFHFSIVYTIEDSVRCLQGLKNTFKDPNNRLTSWSFSGD----ICRLDGVSCFD- 56
           + S LF  F+  + IED V CL+G+KN+F DP  RLTSW F+ +    IC+L+GVSC++ 
Sbjct: 9   SFSLLFSLFAFSFAIEDDVTCLEGVKNSFTDPLGRLTSWDFNNNSVAYICKLNGVSCWNE 68

Query: 55  -DNRVI 41
            +NR+I
Sbjct: 69  KENRII 74


>ref|XP_002327450.1| predicted protein [Populus trichocarpa] gi|222836004|gb|EEE74425.1|
           predicted protein [Populus trichocarpa]
          Length = 606

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/66 (42%), Positives = 48/66 (72%), Gaps = 6/66 (9%)
 Frame = -1

Query: 220 TISCLFFHFSIVYTIEDSVRCLQGLKNTFKDPNNRLTSWSFSGD----ICRLDGVSCFD- 56
           ++S L   F++ ++IED + CL+G+K +F DP  RLTSW+F+ +    +C+L+GVSC++ 
Sbjct: 8   SLSLLLSLFALSFSIEDDITCLEGVKKSFTDPLGRLTSWTFNNNSVAFVCKLNGVSCWNE 67

Query: 55  -DNRVI 41
            +NR+I
Sbjct: 68  KENRII 73


>ref|XP_003543841.1| PREDICTED: LOW QUALITY PROTEIN: probable inactive receptor kinase
           At1g27190-like [Glycine max]
          Length = 598

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 9/71 (12%)
 Frame = -1

Query: 226 FFTISCLFFHFSIVYT---IEDSVRCLQGLKNTFKDPNNRLTSWSFS----GDICRLDGV 68
           F  +  L FHF + +    +E  VRCL+G+K T  DP NRL+ W F     G IC+  GV
Sbjct: 11  FLLLILLGFHFHVFFVSSQVEGDVRCLKGIKETLSDPLNRLSDWRFDNTTIGFICKFAGV 70

Query: 67  SCFDD--NRVI 41
           SC++D  NRV+
Sbjct: 71  SCWNDRENRVL 81


>ref|NP_174039.1| putative inactive receptor kinase [Arabidopsis thaliana]
           gi|75097079|sp|O04567.1|Y1719_ARATH RecName:
           Full=Probable inactive receptor kinase At1g27190; Flags:
           Precursor gi|8778873|gb|AAF79872.1|AC000348_25 T7N9.25
           [Arabidopsis thaliana] gi|53828509|gb|AAU94364.1|
           At1g27190 [Arabidopsis thaliana]
           gi|224589400|gb|ACN59234.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332192671|gb|AEE30792.1| putative inactive receptor
           kinase [Arabidopsis thaliana]
          Length = 601

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 9/71 (12%)
 Frame = -1

Query: 226 FFTISCLFFHFSIVYT---IEDSVRCLQGLKNTFKDPNNRLTSWSF----SGDICRLDGV 68
           F T+  L F  S + +    ED V CLQGLKN+  DP++RL+SWSF    +  IC+L GV
Sbjct: 5   FITLLWLLFISSFLCSSSSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGV 64

Query: 67  SCFD--DNRVI 41
           SC++  +NR+I
Sbjct: 65  SCWNEKENRII 75


>ref|XP_002890616.1| hypothetical protein ARALYDRAFT_889992 [Arabidopsis lyrata subsp.
           lyrata] gi|297336458|gb|EFH66875.1| hypothetical protein
           ARALYDRAFT_889992 [Arabidopsis lyrata subsp. lyrata]
          Length = 601

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 9/71 (12%)
 Frame = -1

Query: 226 FFTISCLFFHFSIVYT---IEDSVRCLQGLKNTFKDPNNRLTSWSF----SGDICRLDGV 68
           F T+  L F  S + +    ED V CLQGLKN+  DP++RL+SWSF    +  IC+L GV
Sbjct: 5   FITLLWLLFISSFLCSSSSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGV 64

Query: 67  SCFD--DNRVI 41
           SC++  +NR+I
Sbjct: 65  SCWNEKENRII 75


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