BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030373
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog ...   196   2e-48
emb|CBI16239.3| unnamed protein product [Vitis vinifera]              189   2e-46
ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog ...   189   2e-46
ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medic...   187   8e-46
ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog ...   186   1e-45

>ref|XP_004149537.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Cucumis
           sativus]
          Length = 371

 Score =  196 bits (497), Expect = 2e-48
 Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 4/135 (2%)
 Frame = +2

Query: 47  QDALSLTEFELMELLDVELSQITSAISRITEVTCPPYQTAQSLMEERVGSEHLA----TG 214
           ++ALSLTEFELMELLDV LS++ SA++ I+E+  PPYQTA SLME+R+ +EHLA    T 
Sbjct: 28  KEALSLTEFELMELLDVGLSEVASAVAHISEIASPPYQTALSLMEQRLQNEHLAGHLSTC 87

Query: 215 LSGLDKCLCGGIPFGVLTELVGPAGIGKTQFCLKLALLAALPVSYGGLSGRVIYIDTEAK 394
           L GLD+ L GGIPFGVLTELVGPAGIGKTQFCLKL+ LAALP SYGGL GRVIYID E+K
Sbjct: 88  LKGLDEALFGGIPFGVLTELVGPAGIGKTQFCLKLSFLAALPPSYGGLDGRVIYIDVESK 147

Query: 395 FSSKRMIEIGIKSFP 439
           FSSKRMIEIG++SFP
Sbjct: 148 FSSKRMIEIGMRSFP 162


>emb|CBI16239.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  189 bits (480), Expect = 2e-46
 Identities = 97/135 (71%), Positives = 114/135 (84%), Gaps = 4/135 (2%)
 Frame = +2

Query: 47  QDALSLTEFELMELLDVELSQITSAISRITEVTCPPYQTAQSLMEERVGSE----HLATG 214
           ++ALSLTEFELMELLDV ++++TSA++ I+E+  PP QTA SLME+RV +E    HL T 
Sbjct: 28  KEALSLTEFELMELLDVGMARVTSAVAHISEIVSPPTQTALSLMEQRVQNEYMAGHLPTR 87

Query: 215 LSGLDKCLCGGIPFGVLTELVGPAGIGKTQFCLKLALLAALPVSYGGLSGRVIYIDTEAK 394
           L GLD+ L GGIPFGVLTELVGP GIGKTQFCLKL+LLA+LP SYGGL GRVIYID E+K
Sbjct: 88  LKGLDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVIYIDAESK 147

Query: 395 FSSKRMIEIGIKSFP 439
           FSS+RMIEIG KSFP
Sbjct: 148 FSSRRMIEIGSKSFP 162


>ref|XP_002281874.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Vitis vinifera]
          Length = 439

 Score =  189 bits (480), Expect = 2e-46
 Identities = 97/135 (71%), Positives = 114/135 (84%), Gaps = 4/135 (2%)
 Frame = +2

Query: 47  QDALSLTEFELMELLDVELSQITSAISRITEVTCPPYQTAQSLMEERVGSE----HLATG 214
           ++ALSLTEFELMELLDV ++++TSA++ I+E+  PP QTA SLME+RV +E    HL T 
Sbjct: 28  KEALSLTEFELMELLDVGMARVTSAVAHISEIVSPPTQTALSLMEQRVQNEYMAGHLPTR 87

Query: 215 LSGLDKCLCGGIPFGVLTELVGPAGIGKTQFCLKLALLAALPVSYGGLSGRVIYIDTEAK 394
           L GLD+ L GGIPFGVLTELVGP GIGKTQFCLKL+LLA+LP SYGGL GRVIYID E+K
Sbjct: 88  LKGLDEALGGGIPFGVLTELVGPPGIGKTQFCLKLSLLASLPASYGGLDGRVIYIDAESK 147

Query: 395 FSSKRMIEIGIKSFP 439
           FSS+RMIEIG KSFP
Sbjct: 148 FSSRRMIEIGSKSFP 162


>ref|XP_003597136.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355486184|gb|AES67387.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 484

 Score =  187 bits (475), Expect = 8e-46
 Identities = 94/131 (71%), Positives = 110/131 (83%)
 Frame = +2

Query: 47  QDALSLTEFELMELLDVELSQITSAISRITEVTCPPYQTAQSLMEERVGSEHLATGLSGL 226
           +DALSLTEFELMELLDV +S++TSA++ I+E+ CPP QT +   E   G  HL T L GL
Sbjct: 28  KDALSLTEFELMELLDVGMSEVTSAMAHISELVCPPCQTQRVRNESLAG--HLPTQLKGL 85

Query: 227 DKCLCGGIPFGVLTELVGPAGIGKTQFCLKLALLAALPVSYGGLSGRVIYIDTEAKFSSK 406
           D+ LCGGIPFGV+TELVGP GIGKTQFCLKL+LLA+LPV+YGGL GRVIYID E+KFSSK
Sbjct: 86  DEALCGGIPFGVVTELVGPPGIGKTQFCLKLSLLASLPVNYGGLDGRVIYIDVESKFSSK 145

Query: 407 RMIEIGIKSFP 439
           R+IEIG KSFP
Sbjct: 146 RLIEIGTKSFP 156


>ref|XP_003547508.1| PREDICTED: DNA repair protein RAD51 homolog 2-like [Glycine max]
          Length = 378

 Score =  186 bits (473), Expect = 1e-45
 Identities = 95/135 (70%), Positives = 112/135 (82%), Gaps = 4/135 (2%)
 Frame = +2

Query: 47  QDALSLTEFELMELLDVELSQITSAISRITEVTCPPYQTAQSLMEERVGSE----HLATG 214
           +DALS TEFELMELLDV   ++TSA++ ++EV CPP QTA  L+E+RV +E    HL+T 
Sbjct: 28  KDALSHTEFELMELLDVGKEEVTSAMAHVSEVVCPPCQTALLLLEQRVLNESLAGHLSTR 87

Query: 215 LSGLDKCLCGGIPFGVLTELVGPAGIGKTQFCLKLALLAALPVSYGGLSGRVIYIDTEAK 394
           L GLD+ LCGGIPFGVLTELVGPAGIGKTQFCLKL+LLA+LP + GGL GRVIYID E+K
Sbjct: 88  LKGLDEALCGGIPFGVLTELVGPAGIGKTQFCLKLSLLASLPTNCGGLDGRVIYIDVESK 147

Query: 395 FSSKRMIEIGIKSFP 439
           F SKR+IEIGI SFP
Sbjct: 148 FRSKRLIEIGINSFP 162