BLASTX nr result

ID: Coptis23_contig00030369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030369
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifo...    75   7e-12
gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifo...    75   7e-12
ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus...    74   1e-11
ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [G...    74   2e-11
ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...    73   2e-11

>gb|AEL98926.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
          Length = 411

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/69 (49%), Positives = 50/69 (72%)
 Frame = -3

Query: 417 SPYSNVLQQFRDKALIRAKLTEADVQLCIDERSLARQMKDYSMSDKIRDEMRKKGIDFMD 238
           +PYS VL Q ++KAL+RA++TE DV   I+ER++AR+ K++  SD+IR ++  KGI  MD
Sbjct: 333 APYSEVLHQLKEKALLRAEMTEDDVSQLIEERAMARKNKEFLKSDEIRRQLTAKGISLMD 392

Query: 237 VGLQTNWRP 211
           +   T WRP
Sbjct: 393 LPTGTTWRP 401


>gb|AEL98925.1| cysteinyl-tRNA synthetase, partial [Silene latifolia]
          Length = 411

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 34/69 (49%), Positives = 50/69 (72%)
 Frame = -3

Query: 417 SPYSNVLQQFRDKALIRAKLTEADVQLCIDERSLARQMKDYSMSDKIRDEMRKKGIDFMD 238
           +PYS VL Q ++KAL+RA++TE DV   I+ER++AR+ K++  SD+IR ++  KGI  MD
Sbjct: 333 APYSEVLDQLKEKALLRAEMTEDDVSQLIEERAMARKNKEFLKSDEIRRQLTAKGISLMD 392

Query: 237 VGLQTNWRP 211
           +   T WRP
Sbjct: 393 LPTGTTWRP 401


>ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
           gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase,
           putative [Ricinus communis]
          Length = 530

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/72 (50%), Positives = 50/72 (69%)
 Frame = -3

Query: 411 YSNVLQQFRDKALIRAKLTEADVQLCIDERSLARQMKDYSMSDKIRDEMRKKGIDFMDVG 232
           Y+ +LQQ +DKAL RA +TE DV   I+ER+ AR+ K++S SD++R  +  KGI  MDVG
Sbjct: 439 YAEILQQLKDKALKRAGVTEDDVLRSIEERAQARKNKEFSRSDQVRANLAAKGIALMDVG 498

Query: 231 LQTNWRPSASLE 196
            +T WRP   +E
Sbjct: 499 KETVWRPCVPVE 510


>ref|XP_003536677.1| PREDICTED: cysteinyl-tRNA synthetase-like [Glycine max]
          Length = 548

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/70 (54%), Positives = 48/70 (68%)
 Frame = -3

Query: 420 SSPYSNVLQQFRDKALIRAKLTEADVQLCIDERSLARQMKDYSMSDKIRDEMRKKGIDFM 241
           S  Y+ VLQQ +DKAL RA LTE +V   IDER+ AR  KD++ SDK+R ++  KGI  M
Sbjct: 434 SKSYAEVLQQLKDKALKRAGLTEDEVLHLIDERTQARINKDFAKSDKMRADLATKGIALM 493

Query: 240 DVGLQTNWRP 211
           DVG +  WRP
Sbjct: 494 DVGNEITWRP 503


>ref|XP_002262997.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
           gi|297735988|emb|CBI23962.3| unnamed protein product
           [Vitis vinifera]
          Length = 513

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/72 (51%), Positives = 49/72 (68%)
 Frame = -3

Query: 411 YSNVLQQFRDKALIRAKLTEADVQLCIDERSLARQMKDYSMSDKIRDEMRKKGIDFMDVG 232
           YS VLQQ + KAL RA + E DV   I+ER+LAR+ KD+S  D+IR ++  KGI  MDVG
Sbjct: 432 YSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKGIALMDVG 491

Query: 231 LQTNWRPSASLE 196
            +T WRP   ++
Sbjct: 492 KETIWRPCVPVQ 503


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