BLASTX nr result
ID: Coptis23_contig00030355
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00030355
(557 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|2... 99 1e-35
ref|XP_003612366.1| Syntaxin-binding protein [Medicago truncatul... 84 2e-27
dbj|BAJ98402.1| predicted protein [Hordeum vulgare subsp. vulgare] 75 7e-27
tpg|DAA36430.1| TPA: hypothetical protein ZEAMMB73_590297 [Zea m... 79 5e-26
ref|XP_002869080.1| hypothetical protein ARALYDRAFT_491090 [Arab... 81 7e-26
>ref|XP_002307215.1| predicted protein [Populus trichocarpa] gi|222856664|gb|EEE94211.1|
predicted protein [Populus trichocarpa]
Length = 890
Score = 98.6 bits (244), Expect(2) = 1e-35
Identities = 53/113 (46%), Positives = 72/113 (63%)
Frame = +3
Query: 219 LLNEQTTSRTIKLVLPLLEPSLDMEVISSNYXXXXXXXXXXXXXXXXGHLCTYDDSVIEK 398
LLNE +R IKL L L EP +D+E+ISS++ GH+ YDD +IEK
Sbjct: 221 LLNEHIETRMIKLGLYLPEPCIDIEIISSSFDQSKHKQDILVVIGKSGHIYVYDDCLIEK 280
Query: 399 YLMQSQSRLAPSLPKQVMVKLPFADYRLPFADSSITIVKFVTDGSKFISGMDE 557
YL+QSQS+++PSLPK+VMVK +PFADSSIT+ KF+T+ ++ DE
Sbjct: 281 YLLQSQSKISPSLPKEVMVK-------MPFADSSITVAKFITNTPNLLTYGDE 326
Score = 77.0 bits (188), Expect(2) = 1e-35
Identities = 36/68 (52%), Positives = 51/68 (75%)
Frame = +1
Query: 1 LWSVPPLSNPGAIISANRELTSPQNVPLCKLNLGYKMDKIPILSLKWVYGNGKSSRLYVN 180
+WS+P ++N ++ +R + QN P+ KLNLGYK+DKIPI LKW+Y +GK+SRLYV
Sbjct: 150 IWSIPAITNSRTELNLDR---ATQNAPILKLNLGYKVDKIPIALLKWLYADGKASRLYVM 206
Query: 181 GASNSASS 204
GAS+ AS+
Sbjct: 207 GASDLAST 214
>ref|XP_003612366.1| Syntaxin-binding protein [Medicago truncatula]
gi|355513701|gb|AES95324.1| Syntaxin-binding protein
[Medicago truncatula]
Length = 1124
Score = 84.3 bits (207), Expect(2) = 2e-27
Identities = 50/113 (44%), Positives = 64/113 (56%)
Frame = +3
Query: 219 LLNEQTTSRTIKLVLPLLEPSLDMEVISSNYXXXXXXXXXXXXXXXXGHLCTYDDSVIEK 398
LLN+ T +RTIKL L L E +DME+IS+ G + YDDS+IEK
Sbjct: 387 LLNDHTETRTIKLGLYLSECCVDMEIISTTNEQSKHKQNSLILLGKSGRVYQYDDSLIEK 446
Query: 399 YLMQSQSRLAPSLPKQVMVKLPFADYRLPFADSSITIVKFVTDGSKFISGMDE 557
YL+Q QS+ PSLPK+VMV RLP DS ITI KF+++ + DE
Sbjct: 447 YLLQGQSKSTPSLPKEVMV-------RLPLTDSGITISKFISNTTDVFYAADE 492
Score = 63.5 bits (153), Expect(2) = 2e-27
Identities = 32/65 (49%), Positives = 42/65 (64%)
Frame = +1
Query: 1 LWSVPPLSNPGAIISANRELTSPQNVPLCKLNLGYKMDKIPILSLKWVYGNGKSSRLYVN 180
+WS+P L+ S S +N+P+ K NLGYK +KI I S+KW+Y GK+SRLYV
Sbjct: 322 IWSIPSLTTGNNSAS----YYSTKNIPMFKFNLGYKSEKICIGSVKWIYAEGKASRLYVM 377
Query: 181 GASNS 195
GAS S
Sbjct: 378 GASKS 382
>dbj|BAJ98402.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1023
Score = 74.7 bits (182), Expect(2) = 7e-27
Identities = 42/112 (37%), Positives = 56/112 (50%)
Frame = +3
Query: 219 LLNEQTTSRTIKLVLPLLEPSLDMEVISSNYXXXXXXXXXXXXXXXXGHLCTYDDSVIEK 398
+LNE++ SR +K+VLPL E ME ++ G +C YDDS IE+
Sbjct: 324 ILNEESESRIVKMVLPLTEACQGMEFVTGLSDPNKQRQSALVLLLKSGQICLYDDSEIER 383
Query: 399 YLMQSQSRLAPSLPKQVMVKLPFADYRLPFADSSITIVKFVTDGSKFISGMD 554
YL+QSQSR P+LP VK P+ DS I + KF T I+ D
Sbjct: 384 YLLQSQSRSPPTLPSHSFVK-------QPYGDSGINVAKFYTSDRTIITNED 428
Score = 71.2 bits (173), Expect(2) = 7e-27
Identities = 33/66 (50%), Positives = 47/66 (71%)
Frame = +1
Query: 1 LWSVPPLSNPGAIISANRELTSPQNVPLCKLNLGYKMDKIPILSLKWVYGNGKSSRLYVN 180
LW+VP + + + N S QN+P+ +LNLGYK+DK+PI++L+WV G+GKS RLY+N
Sbjct: 257 LWAVPDIFS-----AENSSSLSNQNLPIQRLNLGYKLDKVPIVTLRWVPGDGKSGRLYIN 311
Query: 181 GASNSA 198
G S A
Sbjct: 312 GFSEQA 317
>tpg|DAA36430.1| TPA: hypothetical protein ZEAMMB73_590297 [Zea mays]
Length = 1053
Score = 79.3 bits (194), Expect(2) = 5e-26
Identities = 42/113 (37%), Positives = 61/113 (53%)
Frame = +3
Query: 219 LLNEQTTSRTIKLVLPLLEPSLDMEVISSNYXXXXXXXXXXXXXXXXGHLCTYDDSVIEK 398
+LNE++ SR +K+VLP+ E ME+++ GH+C YDDS IE+
Sbjct: 324 ILNEESESRIVKMVLPIAESCQGMELVTGLSDPNKHRQSALALLLKSGHICLYDDSEIER 383
Query: 399 YLMQSQSRLAPSLPKQVMVKLPFADYRLPFADSSITIVKFVTDGSKFISGMDE 557
YL+ SQSR P+LP VK LP+ DS I++ KF T ++ +DE
Sbjct: 384 YLLHSQSRSPPTLPNCSYVK-------LPYGDSGISVAKFYTSNPAALASLDE 429
Score = 63.5 bits (153), Expect(2) = 5e-26
Identities = 26/61 (42%), Positives = 44/61 (72%)
Frame = +1
Query: 1 LWSVPPLSNPGAIISANRELTSPQNVPLCKLNLGYKMDKIPILSLKWVYGNGKSSRLYVN 180
+W++P +++ + N QN+P+ +LNLGYK+DK+PI+SL+W+ +GK+ RLY+N
Sbjct: 257 IWAIPEVTS-----TQNSSSMGGQNLPIQRLNLGYKLDKLPIVSLQWIPSDGKAGRLYIN 311
Query: 181 G 183
G
Sbjct: 312 G 312
>ref|XP_002869080.1| hypothetical protein ARALYDRAFT_491090 [Arabidopsis lyrata subsp.
lyrata] gi|297314916|gb|EFH45339.1| hypothetical protein
ARALYDRAFT_491090 [Arabidopsis lyrata subsp. lyrata]
Length = 1048
Score = 80.9 bits (198), Expect(2) = 7e-26
Identities = 50/114 (43%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +3
Query: 219 LLNEQTTSRTIKLVLPLLEPSLDMEVISSNYXXXXXXXXXXXXXXXX-GHLCTYDDSVIE 395
LLNEQT +R IKL L + EP DME+I ++ G + YDD +IE
Sbjct: 315 LLNEQTETRMIKLGLHVSEPCADMEMIIADVNEQSKHKQDYLFVLGKSGRVYAYDDYMIE 374
Query: 396 KYLMQSQSRLAPSLPKQVMVKLPFADYRLPFADSSITIVKFVTDGSKFISGMDE 557
KYL+QS S+ +PSLPK+ +VKLPF+D SSIT+ KF+T+ S ++ DE
Sbjct: 375 KYLIQSLSKSSPSLPKETVVKLPFSD------SSSITVGKFLTNPSHLLNLSDE 422
Score = 61.6 bits (148), Expect(2) = 7e-26
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Frame = +1
Query: 1 LWSVPPLSNPGAIISANRELTSPQNVPLCKLNLGYKMDKIPILSLKWVYGNGKSSRLYVN 180
+WS+P + E + + +CKLNLGYK +KIPI SLKWVY GK+SR+YV
Sbjct: 255 IWSIP----------SKGESSPESSAMICKLNLGYKSEKIPIASLKWVYAEGKASRVYVI 304
Query: 181 GA-SNS 195
G+ SNS
Sbjct: 305 GSFSNS 310