BLASTX nr result

ID: Coptis23_contig00030351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030351
         (857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170203.1| PREDICTED: uncharacterized protein LOC101230...   272   6e-71
ref|XP_004138425.1| PREDICTED: uncharacterized protein LOC101204...   272   6e-71
ref|XP_002526897.1| ATP binding protein, putative [Ricinus commu...   271   1e-70
ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|2...   268   9e-70
ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263...   266   6e-69

>ref|XP_004170203.1| PREDICTED: uncharacterized protein LOC101230836, partial [Cucumis
           sativus]
          Length = 435

 Score =  272 bits (696), Expect = 6e-71
 Identities = 142/189 (75%), Positives = 159/189 (84%), Gaps = 6/189 (3%)
 Frame = -1

Query: 827 SVEPGPTGRPRRQSCSPSRGRAPNGSIHSSGSSVPAVSRARINSSDNVSPVQIGTKMVER 648
           SVEP P GRPRRQSCSPSRGRAPNG+IH SG SVPA++R    ++DN+SPV IGTKMVER
Sbjct: 240 SVEPVPNGRPRRQSCSPSRGRAPNGNIHLSGGSVPAINRMHSKANDNISPVLIGTKMVER 299

Query: 647 VVNMRKLAPPKQDDQRI--HNNLTGKASSPDSSGFGRNLSKKSLDMALRHMDIRRSIPGS 474
           V+NMRKL PPKQDD+    H NL+GK+SSPDSSGFGR LSKKSLDMA+RHMDIRRSIPG+
Sbjct: 300 VINMRKLVPPKQDDKHSSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGN 359

Query: 473 LR----NIPASSLYSVRSGPVRSRTVSVSDSPLATSSNASSERSVNTNALCFDSSEIEDG 306
           LR    NIPASS+YSVRSGP RSRT+SVSDSPLATSSNASSE SVN N LC D+ EI+D 
Sbjct: 360 LRPLMTNIPASSMYSVRSGPSRSRTISVSDSPLATSSNASSEMSVNNNGLCLDTHEIDD- 418

Query: 305 DHCSERHGR 279
           +  SER GR
Sbjct: 419 EIGSERGGR 427


>ref|XP_004138425.1| PREDICTED: uncharacterized protein LOC101204600 [Cucumis sativus]
          Length = 575

 Score =  272 bits (696), Expect = 6e-71
 Identities = 142/189 (75%), Positives = 159/189 (84%), Gaps = 6/189 (3%)
 Frame = -1

Query: 827 SVEPGPTGRPRRQSCSPSRGRAPNGSIHSSGSSVPAVSRARINSSDNVSPVQIGTKMVER 648
           SVEP P GRPRRQSCSPSRGRAPNG+IH SG SVPA++R    ++DN+SPV IGTKMVER
Sbjct: 380 SVEPVPNGRPRRQSCSPSRGRAPNGNIHLSGGSVPAINRMHSKANDNISPVLIGTKMVER 439

Query: 647 VVNMRKLAPPKQDDQRI--HNNLTGKASSPDSSGFGRNLSKKSLDMALRHMDIRRSIPGS 474
           V+NMRKL PPKQDD+    H NL+GK+SSPDSSGFGR LSKKSLDMA+RHMDIRRSIPG+
Sbjct: 440 VINMRKLVPPKQDDKHSSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGN 499

Query: 473 LR----NIPASSLYSVRSGPVRSRTVSVSDSPLATSSNASSERSVNTNALCFDSSEIEDG 306
           LR    NIPASS+YSVRSGP RSRT+SVSDSPLATSSNASSE SVN N LC D+ EI+D 
Sbjct: 500 LRPLMTNIPASSMYSVRSGPSRSRTISVSDSPLATSSNASSEMSVNNNGLCLDTHEIDD- 558

Query: 305 DHCSERHGR 279
           +  SER GR
Sbjct: 559 EIGSERGGR 567


>ref|XP_002526897.1| ATP binding protein, putative [Ricinus communis]
           gi|223533796|gb|EEF35528.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 568

 Score =  271 bits (693), Expect = 1e-70
 Identities = 143/188 (76%), Positives = 158/188 (84%), Gaps = 5/188 (2%)
 Frame = -1

Query: 827 SVEPGPTGRPRRQSCSPSRGRAPNGSIHSSGSSVPAVSRARINSSDNVSPVQIGTKMVER 648
           SVEP P GRPRRQSCSP+RGRAPNG +H SGSSVPA+SR    ++DNVSPV IGTKMVER
Sbjct: 379 SVEPTPNGRPRRQSCSPARGRAPNGIMHPSGSSVPAISRLHAKANDNVSPVLIGTKMVER 438

Query: 647 VVNMRKLAPPKQDDQ-RIHNNLTGKASSPDSSGFGRNLSKKSLDMALRHMDIRRSIPGSL 471
           V+NMRKLAPPKQDD+   H NL+GK+SSPDSSGFGR LSKKSLDMA+RHMDIRRSIPG+L
Sbjct: 439 VINMRKLAPPKQDDKLSPHGNLSGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGNL 498

Query: 470 R----NIPASSLYSVRSGPVRSRTVSVSDSPLATSSNASSERSVNTNALCFDSSEIEDGD 303
           R    NIPASS+YSVRSG  RSRT+SVSDSPLATSSN SSE SVN N LC D+ E+ED D
Sbjct: 499 RPLMTNIPASSMYSVRSGSARSRTISVSDSPLATSSNGSSEVSVNNNGLCLDAIELED-D 557

Query: 302 HCSERHGR 279
             SER GR
Sbjct: 558 IGSERGGR 565


>ref|XP_002315162.1| predicted protein [Populus trichocarpa] gi|222864202|gb|EEF01333.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  268 bits (686), Expect = 9e-70
 Identities = 144/188 (76%), Positives = 155/188 (82%), Gaps = 5/188 (2%)
 Frame = -1

Query: 827 SVEPGPTGRPRRQSCSPSRGRAPNGSIHSSGSSVPAVSRARINSSDNVSPVQIGTKMVER 648
           SVEP P GRPRRQSCSPSRGRAPNG +H SGSSVPA SR     +DNVSPV IGTKMVER
Sbjct: 375 SVEPTPNGRPRRQSCSPSRGRAPNGIMHPSGSSVPAFSRGHSKINDNVSPVIIGTKMVER 434

Query: 647 VVNMRKLAPPKQDDQRI-HNNLTGKASSPDSSGFGRNLSKKSLDMALRHMDIRRSIPGSL 471
           V+NMRKLAPPKQD +     NLTGK+SSPDSSGFGR LSKKSLDMA+RHMDIRR+IPG+L
Sbjct: 435 VINMRKLAPPKQDGKHSPSGNLTGKSSSPDSSGFGRTLSKKSLDMAIRHMDIRRTIPGNL 494

Query: 470 R----NIPASSLYSVRSGPVRSRTVSVSDSPLATSSNASSERSVNTNALCFDSSEIEDGD 303
           R    NIPASS+YSVRSGP RSRTVSVSDSPLATSSNASSE S+N N LC D  E+ED D
Sbjct: 495 RPLMTNIPASSMYSVRSGPARSRTVSVSDSPLATSSNASSEVSINNNGLCLDGIELED-D 553

Query: 302 HCSERHGR 279
             SER GR
Sbjct: 554 IGSERGGR 561


>ref|XP_002274030.1| PREDICTED: uncharacterized protein LOC100263846 [Vitis vinifera]
           gi|297736627|emb|CBI25498.3| unnamed protein product
           [Vitis vinifera]
          Length = 545

 Score =  266 bits (679), Expect = 6e-69
 Identities = 146/189 (77%), Positives = 156/189 (82%), Gaps = 6/189 (3%)
 Frame = -1

Query: 827 SVEPGPTGRPRRQSCSPSRGRAPNGSIHSSGSSVPAVSRARINSSDNVSPVQIGTKMVER 648
           SV+  P GRPRRQSCSP+RGR PNG IH+SGSSVPAVSR     SDNVSPV IGTKMVER
Sbjct: 349 SVDAAPNGRPRRQSCSPARGRPPNGIIHTSGSSVPAVSRGLSKVSDNVSPVLIGTKMVER 408

Query: 647 VVNMRKLAPPKQDDQRI-HNNLTGK-ASSPDSSGFGRNLSKKSLDMALRHMDIRRSIPGS 474
           V+NMRKL PPKQ+D+     NL+GK ASSPDSSGFGR LSKKSLDMA+RHMDIRRSIPG+
Sbjct: 409 VINMRKLVPPKQEDKHSPRGNLSGKLASSPDSSGFGRTLSKKSLDMAIRHMDIRRSIPGN 468

Query: 473 LR----NIPASSLYSVRSGPVRSRTVSVSDSPLATSSNASSERSVNTNALCFDSSEIEDG 306
           LR    NIPASS+YSVRSGP RSRTVSVSDSPLATSSNASSE SVN NALC D  EIED 
Sbjct: 469 LRPLMTNIPASSMYSVRSGPTRSRTVSVSDSPLATSSNASSEVSVNNNALCVDGGEIED- 527

Query: 305 DHCSERHGR 279
           D  SER GR
Sbjct: 528 DIGSERGGR 536


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