BLASTX nr result

ID: Coptis23_contig00030350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030350
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/102 (35%), Positives = 52/102 (50%)
 Frame = -1

Query: 335 YVFPLCLFTSESLKVLEIGSEWFSKTVGWISIPSSFCFATLKVLRLQYITISFDQSLQKV 156
           +V P CLF  E+L  LEI   +  K      +PSS   + LK+L L  +  + D S Q++
Sbjct: 139 FVLPHCLFNCETLTELEINMPYILK------LPSSISLSCLKILNLYEVIFTDDHSTQQL 192

Query: 155 SLGFPTMEEFIIKGCTWLGIKNIDISAPKLQMLTMDDGWTSS 30
               P + E  I  C W+ +  + ISAPKLQ L + +   SS
Sbjct: 193 -FSLPNLVELEIHECNWMNLVAVSISAPKLQSLDIHEPCQSS 233


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 35/93 (37%), Positives = 50/93 (53%)
 Frame = -1

Query: 335 YVFPLCLFTSESLKVLEIGSEWFSKTVGWISIPSSFCFATLKVLRLQYITISFDQSLQKV 156
           +V PLCLFT  +L  L+I S       G + + SS     LK+L LQ++    + S Q++
Sbjct: 153 FVSPLCLFTCATLTKLKITSH------GVLRLSSSISLPCLKILSLQHVVFPDEDSTQQI 206

Query: 155 SLGFPTMEEFIIKGCTWLGIKNIDISAPKLQML 57
            L   T+E+  I    W  +K I ISAPKL+ L
Sbjct: 207 -LNLRTLEKLKISYYDWKNLKAITISAPKLRSL 238


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