BLASTX nr result

ID: Coptis23_contig00030345 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030345
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002537773.1| conserved hypothetical protein [Ricinus comm...   115   4e-24
gb|EEC71515.1| hypothetical protein OsI_03809 [Oryza sativa Indi...   108   6e-22
tpg|DAA57542.1| TPA: hypothetical protein ZEAMMB73_325815 [Zea m...   104   6e-21
gb|ACG36725.1| tumor-related protein [Zea mays] gi|195658573|gb|...   104   6e-21
ref|XP_002456383.1| hypothetical protein SORBIDRAFT_03g035150 [S...   101   7e-20

>ref|XP_002537773.1| conserved hypothetical protein [Ricinus communis]
           gi|223515136|gb|EEF24610.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  115 bits (288), Expect = 4e-24
 Identities = 52/111 (46%), Positives = 78/111 (70%)
 Frame = +2

Query: 5   EKRTSLTKEDALLAFSSLWCTSFENTFLWIGGCRPTLSIQLVYTLCGIQLESHLMEFLHG 184
           +KR  L   D  + F+  W ++ EN+ LW+ GCRP++ I+LVY LCG Q+ES + E L G
Sbjct: 65  DKRNRLAHNDVSVYFAPTWNSALENSLLWLAGCRPSIFIRLVYALCGSQVESQIAEHLQG 124

Query: 185 VRTGDLGELGNRQLGLVNDLHCRTVRGEEVISSRLAKLQEEIGDDVILLDA 337
            RTG+LG+L  +QL +VN LHC+T++ EE ++++LA LQE+I D+ I + A
Sbjct: 125 TRTGNLGDLSLQQLNMVNVLHCKTIKHEEKLTTQLASLQEDIADEPISMVA 175


>gb|EEC71515.1| hypothetical protein OsI_03809 [Oryza sativa Indica Group]
          Length = 294

 Score =  108 bits (269), Expect = 6e-22
 Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 6/112 (5%)
 Frame = +2

Query: 11  RTSLTKEDALLAFSSLWCTSFENTFLWIGGCRPTLSIQLVYTLCGIQLESHLMEFLHG-- 184
           R +L +ED    F+  WCTSFEN+ LWIGGCRP+L+I+L+Y+L G  LE H+ EF+ G  
Sbjct: 59  RRALAREDGAALFAPPWCTSFENSVLWIGGCRPSLTIRLLYSLSGEGLEEHIEEFISGRG 118

Query: 185 ----VRTGDLGELGNRQLGLVNDLHCRTVRGEEVISSRLAKLQEEIGDDVIL 328
                R   L  +  RQL LVNDLH RT+R E+ +S RLA LQE++ D  +L
Sbjct: 119 ALGAARGMGLLGITARQLELVNDLHRRTLRDEDALSDRLATLQEDVADRPLL 170


>tpg|DAA57542.1| TPA: hypothetical protein ZEAMMB73_325815 [Zea mays]
          Length = 229

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 4/111 (3%)
 Frame = +2

Query: 8   KRTSLTKEDALLAFSSLWCTSFENTFLWIGGCRPTLSIQLVYTLCGIQLESHLMEFLHGV 187
           +R +L++ED +  F+  WCT+FEN+ LW+GGCRP+L+++L+Y L G  LE+ + E L G+
Sbjct: 58  RRRALSREDGVAFFAPPWCTAFENSVLWLGGCRPSLTVRLLYNLSGEGLEAQVEELLGGL 117

Query: 188 RTGDL--GELG--NRQLGLVNDLHCRTVRGEEVISSRLAKLQEEIGDDVIL 328
             G +  G LG  + QL L+NDLH RTV  E  +S RLA LQE+I D  +L
Sbjct: 118 SNGVIPTGALGITSAQLVLINDLHSRTVHQENALSDRLATLQEDIADRPLL 168


>gb|ACG36725.1| tumor-related protein [Zea mays] gi|195658573|gb|ACG48754.1|
           tumor-related protein [Zea mays]
          Length = 297

 Score =  104 bits (260), Expect = 6e-21
 Identities = 53/111 (47%), Positives = 76/111 (68%), Gaps = 4/111 (3%)
 Frame = +2

Query: 8   KRTSLTKEDALLAFSSLWCTSFENTFLWIGGCRPTLSIQLVYTLCGIQLESHLMEFLHGV 187
           +R +L++ED +  F+  WCT+FEN+ LW+GGCRP+L+++L+Y L G  LE+ + E L G+
Sbjct: 58  RRRALSREDGVAFFAPPWCTAFENSVLWLGGCRPSLTVRLLYNLSGEGLEAQVEELLGGL 117

Query: 188 RTGDL--GELG--NRQLGLVNDLHCRTVRGEEVISSRLAKLQEEIGDDVIL 328
             G +  G LG  + QL L+NDLH RTV  E  +S RLA LQE+I D  +L
Sbjct: 118 SNGVIPTGALGITSAQLVLINDLHSRTVHQENALSDRLATLQEDIADRPLL 168


>ref|XP_002456383.1| hypothetical protein SORBIDRAFT_03g035150 [Sorghum bicolor]
           gi|241928358|gb|EES01503.1| hypothetical protein
           SORBIDRAFT_03g035150 [Sorghum bicolor]
          Length = 308

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 5/112 (4%)
 Frame = +2

Query: 8   KRTSLTKEDALLAFSSLWCTSFENTFLWIGGCRPTLSIQLVYTLCGIQLESHLMEFLHG- 184
           +R +L++ED    F+  WCT+FEN+ LW+GGCRP+L+++L+Y + G  LE+ + E L G 
Sbjct: 58  RRRALSREDGAAFFAPPWCTAFENSLLWLGGCRPSLTVRLLYNISGEGLEAQVEEMLGGL 117

Query: 185 ----VRTGDLGELGNRQLGLVNDLHCRTVRGEEVISSRLAKLQEEIGDDVIL 328
               + TG LG + + QL L+NDLH RTV  E  ++ RLA LQE+I D  +L
Sbjct: 118 THGVIPTGALG-ITSAQLLLINDLHSRTVHQENALTDRLATLQEDIADRPLL 168


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