BLASTX nr result

ID: Coptis23_contig00030336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030336
         (758 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65788.1| hypothetical protein VITISV_037591 [Vitis vinifera]   129   7e-28
ref|XP_004152475.1| PREDICTED: uncharacterized protein LOC101222...   125   1e-26
ref|XP_002282787.1| PREDICTED: uncharacterized protein LOC100243...   121   2e-25
ref|XP_002277810.1| PREDICTED: uncharacterized protein LOC100254...   110   4e-22
ref|XP_002511398.1| conserved hypothetical protein [Ricinus comm...   107   2e-21

>emb|CAN65788.1| hypothetical protein VITISV_037591 [Vitis vinifera]
          Length = 268

 Score =  129 bits (324), Expect = 7e-28
 Identities = 78/198 (39%), Positives = 112/198 (56%), Gaps = 13/198 (6%)
 Frame = +2

Query: 116 MKDESVIAICPSFSSYTSNHFAEIASKVTKEFNDRRQDFGLQXXXXXXXXXXXXXXETDN 295
           M+   V+ + PSF+SY S   AEIA+++ +E  +                      + D+
Sbjct: 1   MQRSPVLGLSPSFNSYNSGRLAEIAARIIEELGES------DGNDDEEVKEDEVDNDGDD 54

Query: 296 GFEFNSFCISQERLTVSADEIFFNGLIRPIYPILNRDLSF----HHQVVVKKSL--SRRC 457
             EF       E   +SADEIF+NG IRP++PI NRDL      + +V VK     S R 
Sbjct: 55  DSEFAFVWREPETSPISADEIFYNGQIRPVFPIFNRDLLLXEGQNQEVSVKPPTPASIRR 114

Query: 458 PLKQLLHEER--DSELESETNE---AMPGTFCIWTPKCDQME--KCKKSSSTGTAKRWRL 616
           PL++LL EER  DS   SE +E     PGT+C+WTPK  +    +C+KS+STG++KRW+ 
Sbjct: 115 PLRKLLIEERGTDSCSSSEADELEGVPPGTYCVWTPKVAESPPARCRKSNSTGSSKRWKF 174

Query: 617 RDLIHKTNSEGKENLVFL 670
           RD +H++NS+GK+  VFL
Sbjct: 175 RDFLHRSNSDGKDTFVFL 192


>ref|XP_004152475.1| PREDICTED: uncharacterized protein LOC101222998 [Cucumis sativus]
           gi|449529351|ref|XP_004171663.1| PREDICTED:
           uncharacterized LOC101222998 [Cucumis sativus]
          Length = 339

 Score =  125 bits (313), Expect = 1e-26
 Identities = 82/232 (35%), Positives = 123/232 (53%), Gaps = 51/232 (21%)
 Frame = +2

Query: 131 VIAICPSFSSYTSNHFAEIASKVTKEF---NDRRQD-FGLQXXXXXXXXXXXXXXE---- 286
           + ++ PSFSSY+S  FAEIA++V +EF   +D   D F  +              E    
Sbjct: 10  LFSLSPSFSSYSSGRFAEIAARVVEEFRKESDTDPDIFNWEPDSASSLHYGPEPDEFDQL 69

Query: 287 -----------------TDNGFEFNSFCISQERLTVSADEIFFNGLIRPIYPILNRDLSF 415
                             D+ FEF       E +T+SA++IF+NG IRPIYP+ N +L  
Sbjct: 70  PQILHGGNAETETSDEIADDEFEFAVVPREPEEVTISAEDIFYNGQIRPIYPVFNTNLLL 129

Query: 416 HHQVV------------------VKKSLSRRC---PLKQLLHEERDSEL--ESETNE--- 517
              +V                  +KKS  +R     L +L+ EER++     SET E   
Sbjct: 130 SDSIVDKNNSGGNVDDGEHDDENLKKSKPKRVHRPSLGKLMSEERETNSCSSSETEELDG 189

Query: 518 AMPGTFCIWTPKCDQMEKCKKSSSTGTAKRWRLRDLIHKTNSEGKENLVFLA 673
            +PGT+C+WTPK + +E+CKKS+S G++KRW+LRDL+++++S+GKE  VFL+
Sbjct: 190 VLPGTYCVWTPK-ESLERCKKSNSMGSSKRWKLRDLLYRSSSDGKETFVFLS 240


>ref|XP_002282787.1| PREDICTED: uncharacterized protein LOC100243388 [Vitis vinifera]
          Length = 309

 Score =  121 bits (303), Expect = 2e-25
 Identities = 82/228 (35%), Positives = 118/228 (51%), Gaps = 42/228 (18%)
 Frame = +2

Query: 113 QMKDESVIAICPSFSSYTSNHFAEIASKVTKEF------------NDRRQDF-GLQXXXX 253
           +M+   V+ + PSF+SY S   AEIA+++ +E             ND  +    LQ    
Sbjct: 6   EMQRSPVLGLSPSFNSYNSGRLAEIAARIIEELGESEFQTEIEAGNDLEESIPSLQVKEG 65

Query: 254 XXXXXXXXXXET----------------DNGFEFNSFCISQERLTVSADEIFFNGLIRPI 385
                     ++                D+  EF       E   +SADEIF+NG IRP+
Sbjct: 66  DEESALFSEVKSGNDDEEVKEDEVDNDGDDDSEFAFVWREPETSPISADEIFYNGQIRPV 125

Query: 386 YPILNRDLSF----HHQVVVKKSL--SRRCPLKQLLHEER--DSELESETNE---AMPGT 532
           +PI NRDL      + +V VK     S R PL++LL EER  DS   SE +E     PGT
Sbjct: 126 FPIFNRDLLLGEGQNQEVSVKPPTPASIRRPLRKLLIEERGTDSCSSSEADELEGVPPGT 185

Query: 533 FCIWTPKCDQME--KCKKSSSTGTAKRWRLRDLIHKTNSEGKENLVFL 670
           +C+WTPK  +    +C+KS+STG++KRW+ RD +H++NS+GK+  VFL
Sbjct: 186 YCVWTPKVAESPPARCRKSNSTGSSKRWKFRDFLHRSNSDGKDTFVFL 233


>ref|XP_002277810.1| PREDICTED: uncharacterized protein LOC100254241 [Vitis vinifera]
          Length = 254

 Score =  110 bits (274), Expect = 4e-22
 Identities = 74/187 (39%), Positives = 105/187 (56%), Gaps = 11/187 (5%)
 Frame = +2

Query: 143 CPSFSSYTSNHFAEIASKVTKE---FNDRRQDFGLQXXXXXXXXXXXXXXETDNGFEFNS 313
           CPSF+SY+S+  A++A+KV +E    +DRR D                    ++ FEF  
Sbjct: 11  CPSFNSYSSDRLADVAAKVGEEECASDDRRVD--------------------EDNFEFTF 50

Query: 314 FCISQERLTVSADEIFFNGLIRPIYPILNRDLSFHHQVVVKKSLSRRCPLKQLLHEERD- 490
                    VS  E+     I P++P+ NRDL     V   ++ + R PLK+L  EERD 
Sbjct: 51  ---------VSTGEVLRETQIGPVFPVFNRDLL----VEDGEAKTLRFPLKKLFMEERDG 97

Query: 491 ---SELESETNEAMP-GTFCIWTPKC--DQMEKCKKSSSTGTA-KRWRLRDLIHKTNSEG 649
              S  +++  E +P GT+C+W PK   D  E+CKKSSSTG+A KRWR RDL+ ++NSEG
Sbjct: 98  MSSSSSDADELEGIPEGTYCVWQPKKVPDTPERCKKSSSTGSASKRWRFRDLLRRSNSEG 157

Query: 650 KENLVFL 670
           K++ VFL
Sbjct: 158 KDSFVFL 164


>ref|XP_002511398.1| conserved hypothetical protein [Ricinus communis]
           gi|223550513|gb|EEF52000.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 286

 Score =  107 bits (268), Expect = 2e-21
 Identities = 73/201 (36%), Positives = 102/201 (50%), Gaps = 33/201 (16%)
 Frame = +2

Query: 146 PSFSSYTSNHFAEIASKVTKEF-NDRRQD----FGLQXXXXXXXXXXXXXXETDNG---- 298
           PSF+SY+S   AEIA++V +EF ND  QD    F  Q                + G    
Sbjct: 15  PSFNSYSSGKLAEIAARVVQEFSNDHSQDHDNIFSWQQEYEENKNHKEKDEAQEQGQEDE 74

Query: 299 --FEFNSFCISQERLTVSADEIFFNGLIRPIYPILNRDLSFHHQ------------VVVK 436
             FEF   C       +SAD+IF+NG IRPIYP+ N  L    +                
Sbjct: 75  DEFEFAIVCREPVESPISADDIFYNGQIRPIYPLFNTKLLLDKEDQESSKSKNTTTATTT 134

Query: 437 KSLSRRCPLKQLLHEERDSEL--------ESETNEAMPG-TFCIWTPKCDQMEKCKKSSS 589
            +   R PL++L  EER+S          E++  E +P  ++C+WTPK D    CKKSSS
Sbjct: 135 TTKPNRLPLRKLFSEERESSTTTSSCSSSEADELENVPAESYCVWTPKKD---VCKKSSS 191

Query: 590 TGTAKRWRLRDLIH-KTNSEG 649
           TG++KRW+ RDL++ ++NS+G
Sbjct: 192 TGSSKRWKFRDLLYNRSNSDG 212


Top