BLASTX nr result

ID: Coptis23_contig00030333 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030333
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603319.1| Ethylene-responsive transcription factor SHI...   193   4e-47
ref|XP_003522460.1| PREDICTED: protein PPLZ02-like [Glycine max]      191   1e-46
gb|AFK41748.1| unknown [Medicago truncatula]                          191   2e-46
ref|XP_003526228.1| PREDICTED: protein PPLZ02-like [Glycine max]      188   2e-45
ref|XP_002285373.1| PREDICTED: ethylene-responsive transcription...   184   2e-44

>ref|XP_003603319.1| Ethylene-responsive transcription factor SHINE [Medicago
           truncatula] gi|355492367|gb|AES73570.1|
           Ethylene-responsive transcription factor SHINE [Medicago
           truncatula]
          Length = 259

 Score =  193 bits (491), Expect = 4e-47
 Identities = 104/190 (54%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
 Frame = -3

Query: 805 NMARAQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXRLMCGPRA 626
           NMAR QQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFET            RLMCG RA
Sbjct: 70  NMARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRA 129

Query: 625 RTNFPYNPNVSQXXXXXXXXXXXXXXLHRCYLASLQMTRPIIANEPERAXXXXXXXXXXX 446
           RTNFPYNPNVSQ              LHRCY+ASLQ+TRPI   +P++            
Sbjct: 130 RTNFPYNPNVSQSSSSKLLSATLTAKLHRCYMASLQITRPISLQQPQK--------QSSQ 181

Query: 445 IVGNSEEIGAYSSKRSMTTELVESNWGTKESNWSVKKVKMENTQQF-SPLEEDHVEQMIE 269
            V  S       S + + T +        E NW  KKVK+EN+QQF  PLEEDH+EQMIE
Sbjct: 182 SVNISTNNAPMKSSQEIDTTMKHEEEKESEGNWVFKKVKVENSQQFIKPLEEDHIEQMIE 241

Query: 268 ELLNCGPVEL 239
           ELL+ G +EL
Sbjct: 242 ELLHYGSIEL 251


>ref|XP_003522460.1| PREDICTED: protein PPLZ02-like [Glycine max]
          Length = 193

 Score =  191 bits (486), Expect = 1e-46
 Identities = 104/193 (53%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
 Frame = -3

Query: 802 MARAQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXRLMCGPRAR 623
           MAR+QQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFET            RLMCG RAR
Sbjct: 1   MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRAR 60

Query: 622 TNFPYNPNVSQXXXXXXXXXXXXXXLHRCYLASLQMTRPIIANEPERAXXXXXXXXXXXI 443
           TNFPYNPN SQ              LHRCY+ASLQMTRP    EP+R             
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRPSSQAEPQRVASPNVI------ 114

Query: 442 VGNSEEIGAYSSKRSMTTELV-----ESNWGTKESNWSVKKVKMENTQQFSPLEEDHVEQ 278
              +     +S K + T  L+     +      E NW  KKVK+EN QQF PLEEDH+EQ
Sbjct: 115 ---TSSASNFSMKSNETETLLLPQKRQEEEQEAEGNWVFKKVKVENAQQFKPLEEDHIEQ 171

Query: 277 MIEELLNCGPVEL 239
           MIEELL+ G +EL
Sbjct: 172 MIEELLHYGSIEL 184


>gb|AFK41748.1| unknown [Medicago truncatula]
          Length = 189

 Score =  191 bits (485), Expect = 2e-46
 Identities = 103/189 (54%), Positives = 117/189 (61%), Gaps = 1/189 (0%)
 Frame = -3

Query: 802 MARAQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXRLMCGPRAR 623
           MAR QQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFET            RLMCG RAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRAR 60

Query: 622 TNFPYNPNVSQXXXXXXXXXXXXXXLHRCYLASLQMTRPIIANEPERAXXXXXXXXXXXI 443
           TNFPYNPNVSQ              LHRCY+ASLQ+TRPI   +P++             
Sbjct: 61  TNFPYNPNVSQSSSSKLLSATLTAKLHRCYMASLQITRPISLQQPQK--------QSSQS 112

Query: 442 VGNSEEIGAYSSKRSMTTELVESNWGTKESNWSVKKVKMENTQQF-SPLEEDHVEQMIEE 266
           V  S       S + + T +        E NW  KKVK+EN+QQF  PLEEDH+EQMIEE
Sbjct: 113 VNISTNNAPMKSSQEIDTTMKHEEEKESEGNWVFKKVKVENSQQFIKPLEEDHIEQMIEE 172

Query: 265 LLNCGPVEL 239
           LL+ G +EL
Sbjct: 173 LLHYGSIEL 181


>ref|XP_003526228.1| PREDICTED: protein PPLZ02-like [Glycine max]
          Length = 194

 Score =  188 bits (477), Expect = 2e-45
 Identities = 103/193 (53%), Positives = 118/193 (61%), Gaps = 5/193 (2%)
 Frame = -3

Query: 802 MARAQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXRLMCGPRAR 623
           MAR+QQRYRGVRQRHWGSWVSEIRHP+LKTRIWLGTFET            RLMCG RAR
Sbjct: 1   MARSQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRAR 60

Query: 622 TNFPYNPNVSQXXXXXXXXXXXXXXLHRCYLASLQMTRPIIANEPERAXXXXXXXXXXXI 443
           TNFPYNPN SQ              LHRCY+ASLQMTRP  +++PE              
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQMTRP--SSQPETQRVVASPNVITSS 118

Query: 442 VGNSEEIGAYSSKRSMTTELV-----ESNWGTKESNWSVKKVKMENTQQFSPLEEDHVEQ 278
             N      +S K + T  ++     +      E NW  KKVK+EN QQF PLEEDH+EQ
Sbjct: 119 ASN------FSMKSNETETMLLPQKRQEEEQEGEGNWVFKKVKVENAQQFKPLEEDHIEQ 172

Query: 277 MIEELLNCGPVEL 239
           MIEELL+ G +EL
Sbjct: 173 MIEELLHYGSIEL 185


>ref|XP_002285373.1| PREDICTED: ethylene-responsive transcription factor ERF003 [Vitis
           vinifera]
          Length = 187

 Score =  184 bits (468), Expect = 2e-44
 Identities = 104/190 (54%), Positives = 123/190 (64%), Gaps = 2/190 (1%)
 Frame = -3

Query: 802 MARAQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETXXXXXXXXXXXXRLMCGPRAR 623
           MAR QQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFET            RLMCGPRAR
Sbjct: 1   MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 622 TNFPYNPNVSQXXXXXXXXXXXXXXLHRCYLASLQMTRPIIANEPERAXXXXXXXXXXXI 443
           TNFPYNPN SQ              LHRCY+ASLQ+T+  + +EP++            I
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLTAKLHRCYMASLQLTKQSL-HEPQK-PPTSHVATTTSI 118

Query: 442 VGNSEEIGAYS-SKRSMTTELVESNWGTKESNWSVKKVKME-NTQQFSPLEEDHVEQMIE 269
            G   E G +S  KR +T +         E+NW VKKV+++ NTQQF PLE+DH++QMIE
Sbjct: 119 AGKVGESGQWSPEKRPVTVQ-------QPEANWVVKKVQVDSNTQQFKPLEDDHIQQMIE 171

Query: 268 ELLNCGPVEL 239
           ELL+ G +EL
Sbjct: 172 ELLDYGSIEL 181


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