BLASTX nr result
ID: Coptis23_contig00030325
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030325 (679 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Viti... 129 2e-28 ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|2... 126 3e-28 emb|CBI17417.3| unnamed protein product [Vitis vinifera] 129 5e-28 gb|ABB45844.1| hypothetical protein [Eutrema halophilum] 122 2e-27 emb|CBI38005.3| unnamed protein product [Vitis vinifera] 117 2e-27 >ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera] Length = 338 Score = 129 bits (324), Expect(2) = 2e-28 Identities = 59/64 (92%), Positives = 62/64 (96%) Frame = -3 Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282 V KTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPA SPTFSS++HSN+HRKVLEMRRK Sbjct: 262 VQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRK 321 Query: 281 KEVT 270 KEVT Sbjct: 322 KEVT 325 Score = 22.3 bits (46), Expect(2) = 2e-28 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 6/47 (12%) Frame = -2 Query: 654 LIFNNTGQNLDMFSFMGXXXXXXXXXXPMTEAQ------QRRCSHCG 532 LI+ NT QN++ F EA RCSHCG Sbjct: 215 LIYPNTCQNVESFHSAVKPPAKKHKKRLDPEASGSAQPTPHRCSHCG 261 >ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|222850171|gb|EEE87718.1| predicted protein [Populus trichocarpa] Length = 329 Score = 126 bits (316), Expect(2) = 3e-28 Identities = 58/63 (92%), Positives = 60/63 (95%) Frame = -3 Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282 V KTPQWRTGPLGAKTLCNACGVRYKSGRL PEYRPA SPTFSS+VHSN+HRKVLEMRRK Sbjct: 253 VQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSEVHSNSHRKVLEMRRK 312 Query: 281 KEV 273 KEV Sbjct: 313 KEV 315 Score = 25.0 bits (53), Expect(2) = 3e-28 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 8/49 (16%) Frame = -2 Query: 657 CLIFNNTGQNLDMFSFMGXXXXXXXXXXPMTEAQ--------QRRCSHC 535 CL+ NT Q D S++ P + QRRCSHC Sbjct: 203 CLVATNTVQTADSLSWLSEQPMKISKKRPAVHSSGLMASTQFQRRCSHC 251 >emb|CBI17417.3| unnamed protein product [Vitis vinifera] Length = 305 Score = 129 bits (324), Expect = 5e-28 Identities = 59/64 (92%), Positives = 62/64 (96%) Frame = -3 Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282 V KTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPA SPTFSS++HSN+HRKVLEMRRK Sbjct: 229 VQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRK 288 Query: 281 KEVT 270 KEVT Sbjct: 289 KEVT 292 >gb|ABB45844.1| hypothetical protein [Eutrema halophilum] Length = 332 Score = 122 bits (306), Expect(2) = 2e-27 Identities = 54/64 (84%), Positives = 60/64 (93%) Frame = -3 Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282 + KTPQWR GP+GAKTLCNACGVRYKSGRLLPEYRPA SPTFSS++HSN+HRKV+EMRRK Sbjct: 249 IQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVMEMRRK 308 Query: 281 KEVT 270 KE T Sbjct: 309 KEPT 312 Score = 26.2 bits (56), Expect(2) = 2e-27 Identities = 9/9 (100%), Positives = 9/9 (100%) Frame = -2 Query: 558 QQRRCSHCG 532 QQRRCSHCG Sbjct: 240 QQRRCSHCG 248 >emb|CBI38005.3| unnamed protein product [Vitis vinifera] Length = 352 Score = 117 bits (292), Expect(2) = 2e-27 Identities = 52/62 (83%), Positives = 57/62 (91%) Frame = -3 Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282 V KTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPA SPTFS ++HSN+HRKVLE+RRK Sbjct: 284 VQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSVEIHSNSHRKVLEIRRK 343 Query: 281 KE 276 KE Sbjct: 344 KE 345 Score = 31.2 bits (69), Expect(2) = 2e-27 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = -2 Query: 657 CLIFNNTGQNLDMFSFMGXXXXXXXXXXPMTEAQ-QRRCSHC 535 CLIF NT N++ F + P ++Q QRRCSHC Sbjct: 241 CLIFANTVHNMESFYSLEKPPAKKPKKSPSADSQPQRRCSHC 282