BLASTX nr result

ID: Coptis23_contig00030325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030325
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Viti...   129   2e-28
ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|2...   126   3e-28
emb|CBI17417.3| unnamed protein product [Vitis vinifera]              129   5e-28
gb|ABB45844.1| hypothetical protein [Eutrema halophilum]              122   2e-27
emb|CBI38005.3| unnamed protein product [Vitis vinifera]              117   2e-27

>ref|XP_002272762.1| PREDICTED: GATA transcription factor 5 [Vitis vinifera]
          Length = 338

 Score =  129 bits (324), Expect(2) = 2e-28
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -3

Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282
           V KTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPA SPTFSS++HSN+HRKVLEMRRK
Sbjct: 262 VQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRK 321

Query: 281 KEVT 270
           KEVT
Sbjct: 322 KEVT 325



 Score = 22.3 bits (46), Expect(2) = 2e-28
 Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 6/47 (12%)
 Frame = -2

Query: 654 LIFNNTGQNLDMFSFMGXXXXXXXXXXPMTEAQ------QRRCSHCG 532
           LI+ NT QN++ F                 EA         RCSHCG
Sbjct: 215 LIYPNTCQNVESFHSAVKPPAKKHKKRLDPEASGSAQPTPHRCSHCG 261


>ref|XP_002313763.1| predicted protein [Populus trichocarpa] gi|222850171|gb|EEE87718.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score =  126 bits (316), Expect(2) = 3e-28
 Identities = 58/63 (92%), Positives = 60/63 (95%)
 Frame = -3

Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282
           V KTPQWRTGPLGAKTLCNACGVRYKSGRL PEYRPA SPTFSS+VHSN+HRKVLEMRRK
Sbjct: 253 VQKTPQWRTGPLGAKTLCNACGVRYKSGRLFPEYRPACSPTFSSEVHSNSHRKVLEMRRK 312

Query: 281 KEV 273
           KEV
Sbjct: 313 KEV 315



 Score = 25.0 bits (53), Expect(2) = 3e-28
 Identities = 15/49 (30%), Positives = 19/49 (38%), Gaps = 8/49 (16%)
 Frame = -2

Query: 657 CLIFNNTGQNLDMFSFMGXXXXXXXXXXPMTEAQ--------QRRCSHC 535
           CL+  NT Q  D  S++           P   +         QRRCSHC
Sbjct: 203 CLVATNTVQTADSLSWLSEQPMKISKKRPAVHSSGLMASTQFQRRCSHC 251


>emb|CBI17417.3| unnamed protein product [Vitis vinifera]
          Length = 305

 Score =  129 bits (324), Expect = 5e-28
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -3

Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282
           V KTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPA SPTFSS++HSN+HRKVLEMRRK
Sbjct: 229 VQKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSEIHSNHHRKVLEMRRK 288

Query: 281 KEVT 270
           KEVT
Sbjct: 289 KEVT 292


>gb|ABB45844.1| hypothetical protein [Eutrema halophilum]
          Length = 332

 Score =  122 bits (306), Expect(2) = 2e-27
 Identities = 54/64 (84%), Positives = 60/64 (93%)
 Frame = -3

Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282
           + KTPQWR GP+GAKTLCNACGVRYKSGRLLPEYRPA SPTFSS++HSN+HRKV+EMRRK
Sbjct: 249 IQKTPQWRAGPMGAKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVMEMRRK 308

Query: 281 KEVT 270
           KE T
Sbjct: 309 KEPT 312



 Score = 26.2 bits (56), Expect(2) = 2e-27
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -2

Query: 558 QQRRCSHCG 532
           QQRRCSHCG
Sbjct: 240 QQRRCSHCG 248


>emb|CBI38005.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  117 bits (292), Expect(2) = 2e-27
 Identities = 52/62 (83%), Positives = 57/62 (91%)
 Frame = -3

Query: 461 VNKTPQWRTGPLGAKTLCNACGVRYKSGRLLPEYRPAISPTFSSDVHSNNHRKVLEMRRK 282
           V KTPQWRTGPLG KTLCNACGVR+KSGRL PEYRPA SPTFS ++HSN+HRKVLE+RRK
Sbjct: 284 VQKTPQWRTGPLGPKTLCNACGVRFKSGRLFPEYRPACSPTFSVEIHSNSHRKVLEIRRK 343

Query: 281 KE 276
           KE
Sbjct: 344 KE 345



 Score = 31.2 bits (69), Expect(2) = 2e-27
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -2

Query: 657 CLIFNNTGQNLDMFSFMGXXXXXXXXXXPMTEAQ-QRRCSHC 535
           CLIF NT  N++ F  +           P  ++Q QRRCSHC
Sbjct: 241 CLIFANTVHNMESFYSLEKPPAKKPKKSPSADSQPQRRCSHC 282


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