BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030312
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531983.1| RNA binding protein, putative [Ricinus commu...   225   2e-57
ref|XP_002281425.1| PREDICTED: putative nuclease HARBI1 [Vitis v...   214   6e-54
ref|XP_004147700.1| PREDICTED: putative nuclease HARBI1-like [Cu...   209   2e-52
ref|XP_002311148.1| predicted protein [Populus trichocarpa] gi|2...   208   3e-52
ref|XP_002279396.1| PREDICTED: putative nuclease HARBI1 [Vitis v...   204   6e-51

>ref|XP_002531983.1| RNA binding protein, putative [Ricinus communis]
           gi|223528380|gb|EEF30419.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 591

 Score =  225 bits (574), Expect = 2e-57
 Identities = 110/160 (68%), Positives = 127/160 (79%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 DWWDVFSKRITGSLH-RRGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPL 303
           DWWD FSKRITG L   R   + ESVFKISRKTF+YICSLVN+DL A+ SN TG NGKPL
Sbjct: 36  DWWDDFSKRITGPLSGSRNTKKFESVFKISRKTFNYICSLVNNDLKARQSNLTGTNGKPL 95

Query: 302 CVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESE 123
              DQVA+ALRRL S +SL +IG+SFG++Q+TVSHVTWRFVEAMEERGLHHL+WP+TE+E
Sbjct: 96  SPNDQVAIALRRLSSGESLSSIGDSFGVNQSTVSHVTWRFVEAMEERGLHHLRWPSTETE 155

Query: 122 MXXXXXXXXXIQGLPNCCGAIDTTHIRLSLPQVDHSNDVW 3
           M         I  LPNCCG IDTTH+ ++LP VDHSNDVW
Sbjct: 156 MAAIKSKFEKIHSLPNCCGVIDTTHVVMTLPAVDHSNDVW 195


>ref|XP_002281425.1| PREDICTED: putative nuclease HARBI1 [Vitis vinifera]
           gi|297746131|emb|CBI16187.3| unnamed protein product
           [Vitis vinifera]
          Length = 384

 Score =  214 bits (545), Expect = 6e-54
 Identities = 102/160 (63%), Positives = 123/160 (76%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 DWWDVFSKRITGSLHR-RGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPL 303
           DWWD FSKRI G L   +G  + ESVFKISRKTF+YIC+LV +D++AKP NF   NG+P+
Sbjct: 26  DWWDEFSKRIAGLLSSSKGLDKFESVFKISRKTFNYICALVKEDMMAKPGNFIFTNGRPM 85

Query: 302 CVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESE 123
           C+ DQVAVALRRL S DSL+TIG++FG++ +TVS VTWRFVE MEER LHHLQWP+TE E
Sbjct: 86  CLNDQVAVALRRLSSGDSLLTIGDAFGLNHSTVSQVTWRFVEIMEERALHHLQWPSTEPE 145

Query: 122 MXXXXXXXXXIQGLPNCCGAIDTTHIRLSLPQVDHSNDVW 3
           +         I+GLPNCCGAIDTTHI + LP  D +N VW
Sbjct: 146 ITEITSKFEKIRGLPNCCGAIDTTHIMMCLPSADSANSVW 185


>ref|XP_004147700.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus]
           gi|449513511|ref|XP_004164345.1| PREDICTED: putative
           nuclease HARBI1-like [Cucumis sativus]
          Length = 392

 Score =  209 bits (532), Expect = 2e-52
 Identities = 96/159 (60%), Positives = 122/159 (76%)
 Frame = -1

Query: 479 DWWDVFSKRITGSLHRRGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPLC 300
           DWWD FS+RITG L +    + ESVFKISRKTF YICSLV + ++AK S+FT  NGKPL 
Sbjct: 35  DWWDEFSQRITGPLSQSKNTKFESVFKISRKTFSYICSLVKEVMMAKTSSFTDLNGKPLS 94

Query: 299 VQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESEM 120
           + DQVAVALRRLCS +SL  IG+SFG++Q++VS +TWRFVEAMEE+GLHHL WP+TE +M
Sbjct: 95  LNDQVAVALRRLCSGESLSNIGDSFGLNQSSVSQITWRFVEAMEEKGLHHLSWPSTEEDM 154

Query: 119 XXXXXXXXXIQGLPNCCGAIDTTHIRLSLPQVDHSNDVW 3
                    I+GLPNCCG ++TTHI ++LP  + +N +W
Sbjct: 155 DKIKSKFKKIRGLPNCCGVVETTHIMMTLPTSESANGIW 193


>ref|XP_002311148.1| predicted protein [Populus trichocarpa] gi|222850968|gb|EEE88515.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  208 bits (530), Expect = 3e-52
 Identities = 107/161 (66%), Positives = 122/161 (75%), Gaps = 2/161 (1%)
 Frame = -1

Query: 479 DWWDV-FSKRITG-SLHRRGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKP 306
           DWWD  FSKRITG S       + ES FKISRKTF+YICSLV +DL A+ SNFTG NGKP
Sbjct: 44  DWWDDDFSKRITGPSSESNNSKKFESFFKISRKTFNYICSLVKEDLRARQSNFTGSNGKP 103

Query: 305 LCVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTES 126
           L V DQVAVALRRL S +SL  IG+  G++Q+TVS +TWRFVEAMEERGLHHL WP+TE+
Sbjct: 104 LSVTDQVAVALRRLSSGESLSNIGDLLGINQSTVSQITWRFVEAMEERGLHHLCWPSTEA 163

Query: 125 EMXXXXXXXXXIQGLPNCCGAIDTTHIRLSLPQVDHSNDVW 3
           EM         I GLPNCCG+IDTTHI ++LP VD SNDVW
Sbjct: 164 EMEEIKSNFEKICGLPNCCGSIDTTHIVMTLPTVDRSNDVW 204


>ref|XP_002279396.1| PREDICTED: putative nuclease HARBI1 [Vitis vinifera]
          Length = 398

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/160 (60%), Positives = 124/160 (77%), Gaps = 1/160 (0%)
 Frame = -1

Query: 479 DWWDVFSKRITGSLHR-RGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPL 303
           DWWD FSKRITG L + R  +  ESVFKISRKTF+YICSLV +D++AKP+NF+  NG PL
Sbjct: 40  DWWDDFSKRITGPLSQSRLSLTFESVFKISRKTFNYICSLVKEDMMAKPANFSASNGNPL 99

Query: 302 CVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESE 123
            + D+VA+ALRRL S +S   +G+SFG++Q+TV+ +TW+FVE+ME RGLHHLQWP+TE++
Sbjct: 100 SLNDRVAIALRRLSSGESFSIVGDSFGVNQSTVAQITWKFVESMEVRGLHHLQWPSTEAD 159

Query: 122 MXXXXXXXXXIQGLPNCCGAIDTTHIRLSLPQVDHSNDVW 3
           M         I+GLPNCCGA+DTTHI +SL  +  SN VW
Sbjct: 160 MEETKSSFEKIRGLPNCCGAVDTTHISMSLSTMGTSNKVW 199