BLASTX nr result

ID: Coptis23_contig00030310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030310
         (898 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234623.1| starch synthase III [Solanum lycopersicum] g...   544   e-153
gb|ACT83376.1| soluble starch synthase [Solanum tuberosum]            544   e-152
sp|Q43846.1|SSY3_SOLTU RecName: Full=Soluble starch synthase 3, ...   541   e-151
emb|CAA64173.1| soluble-starch-synthase [Solanum tuberosum]           541   e-151
ref|XP_002269011.2| PREDICTED: soluble starch synthase 3, chloro...   539   e-151

>ref|NP_001234623.1| starch synthase III [Solanum lycopersicum]
            gi|247643236|gb|ACT09059.1| starch synthase III precursor
            [Solanum lycopersicum]
          Length = 1230

 Score =  544 bits (1402), Expect = e-153
 Identities = 249/299 (83%), Positives = 276/299 (92%)
 Frame = -2

Query: 897  PPQRMLPANSGSHVKASVKVPLDAYMMDFVFSEKEDGGMYDNNYGVDYHIPVSGGVAKEP 718
            PPQ+MLPA +G+HVKA+VKVPLDAYMMDFVFSE+EDGG++DN  G+DYHIPV GGVAKEP
Sbjct: 719  PPQKMLPAENGTHVKATVKVPLDAYMMDFVFSEREDGGIFDNKSGMDYHIPVFGGVAKEP 778

Query: 717  PMHIVHISVEMAPIAKVGGLGDVVTSLSRAIQDLGHNIDIILPKYDSLKFDNIKEFHFHR 538
            PMHIVHI+VEMAPIAKVGGLGDVVTSLSRA+QDL HN+DIILPKYD LK +N+K+F FH+
Sbjct: 779  PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLKMNNVKDFRFHK 838

Query: 537  SYFWSGTEIKVWLGIVEGLSVYFLEPQNGMFSAGCVYGCRNDGERFGFFCHAALEFMLQS 358
            SYFW GTEIKVW G VEGLSVYFLEPQNG+F  GCVYGC NDGERFGFFCHAALEF+LQ 
Sbjct: 839  SYFWGGTEIKVWFGKVEGLSVYFLEPQNGLFWKGCVYGCSNDGERFGFFCHAALEFLLQG 898

Query: 357  GLNPDILHCHDWSSAPVAWLFKKHYRHYGLSKARVVFTIHNLEFGAPLIGKAMTYTDKAT 178
            G +PDI+HCHDWSSAPVAWLFK+ Y HYGLSK+R+VFTIHNLEFGA LIG+AMT+ DKAT
Sbjct: 899  GFSPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLIGRAMTHADKAT 958

Query: 177  TVSQTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPYNDKFIPVPYTSENVVEGKMAA 1
            TVS TYS+EVSGNPVIAPHL+KFHGIVNGIDPDIWDP NDKFIP+PYTSENVVEGK AA
Sbjct: 959  TVSPTYSQEVSGNPVIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAA 1017


>gb|ACT83376.1| soluble starch synthase [Solanum tuberosum]
          Length = 1230

 Score =  544 bits (1401), Expect = e-152
 Identities = 248/299 (82%), Positives = 276/299 (92%)
 Frame = -2

Query: 897  PPQRMLPANSGSHVKASVKVPLDAYMMDFVFSEKEDGGMYDNNYGVDYHIPVSGGVAKEP 718
            PPQ+M PA +G+HV+A+VKVPLDAYMMDFVFSE+EDGG++DN  G+DYHIPV GGVAKEP
Sbjct: 719  PPQKMSPAENGTHVRATVKVPLDAYMMDFVFSEREDGGIFDNKSGMDYHIPVFGGVAKEP 778

Query: 717  PMHIVHISVEMAPIAKVGGLGDVVTSLSRAIQDLGHNIDIILPKYDSLKFDNIKEFHFHR 538
            PMHIVHI+VEMAPIAKVGGLGDVVTSLSRA+QDL HN+DIILPKYD LK +N+K+F FH+
Sbjct: 779  PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLKMNNVKDFRFHK 838

Query: 537  SYFWSGTEIKVWLGIVEGLSVYFLEPQNGMFSAGCVYGCRNDGERFGFFCHAALEFMLQS 358
            SYFW GTEIKVW G VEGLSVYFLEPQNG+FS GC+YGC NDGERFGFFCHAALEF+LQ 
Sbjct: 839  SYFWGGTEIKVWFGKVEGLSVYFLEPQNGLFSKGCIYGCSNDGERFGFFCHAALEFLLQG 898

Query: 357  GLNPDILHCHDWSSAPVAWLFKKHYRHYGLSKARVVFTIHNLEFGAPLIGKAMTYTDKAT 178
            G +PDI+HCHDWSSAPVAWLFK+ YRHYGLSK+R+VFTIHNLEFGA LIG+AMT  DKAT
Sbjct: 899  GFSPDIIHCHDWSSAPVAWLFKEQYRHYGLSKSRIVFTIHNLEFGADLIGRAMTNADKAT 958

Query: 177  TVSQTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPYNDKFIPVPYTSENVVEGKMAA 1
            TVS TYS+EVSGNPVIAPHL+KFHGIVNGIDPDIWDP NDKFIP+PYTSENVVEGK AA
Sbjct: 959  TVSPTYSQEVSGNPVIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAA 1017


>sp|Q43846.1|SSY3_SOLTU RecName: Full=Soluble starch synthase 3, chloroplastic/amyloplastic;
            AltName: Full=Soluble starch synthase III; Short=SS III;
            Flags: Precursor gi|1200154|emb|CAA65065.1| glycogen
            (starch) synthase [Solanum tuberosum]
          Length = 1230

 Score =  541 bits (1393), Expect = e-151
 Identities = 247/299 (82%), Positives = 275/299 (91%)
 Frame = -2

Query: 897  PPQRMLPANSGSHVKASVKVPLDAYMMDFVFSEKEDGGMYDNNYGVDYHIPVSGGVAKEP 718
            PPQ+M PA +G+HV+A+VKVPLDAYMMDFVFSE+EDGG++DN  G+DYHIPV GGVAKEP
Sbjct: 719  PPQKMSPAENGTHVRATVKVPLDAYMMDFVFSEREDGGIFDNKSGMDYHIPVFGGVAKEP 778

Query: 717  PMHIVHISVEMAPIAKVGGLGDVVTSLSRAIQDLGHNIDIILPKYDSLKFDNIKEFHFHR 538
            PMHIVHI+VEMAPIAKVGGLGDVVTSLSRA+QDL HN+DIILPKYD LK +N+K+F FH+
Sbjct: 779  PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLKMNNVKDFRFHK 838

Query: 537  SYFWSGTEIKVWLGIVEGLSVYFLEPQNGMFSAGCVYGCRNDGERFGFFCHAALEFMLQS 358
            +YFW GTEIKVW G VEGLSVYFLEPQNG+FS GCVYGC NDGERFGFFCHAALEF+LQ 
Sbjct: 839  NYFWGGTEIKVWFGKVEGLSVYFLEPQNGLFSKGCVYGCSNDGERFGFFCHAALEFLLQG 898

Query: 357  GLNPDILHCHDWSSAPVAWLFKKHYRHYGLSKARVVFTIHNLEFGAPLIGKAMTYTDKAT 178
            G +PDI+HCHDWSSAPVAWLFK+ Y HYGLSK+R+VFTIHNLEFGA LIG+AMT  DKAT
Sbjct: 899  GFSPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLIGRAMTNADKAT 958

Query: 177  TVSQTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPYNDKFIPVPYTSENVVEGKMAA 1
            TVS TYS+EVSGNPVIAPHL+KFHGIVNGIDPDIWDP NDKFIP+PYTSENVVEGK AA
Sbjct: 959  TVSPTYSQEVSGNPVIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAA 1017


>emb|CAA64173.1| soluble-starch-synthase [Solanum tuberosum]
          Length = 1230

 Score =  541 bits (1393), Expect = e-151
 Identities = 247/299 (82%), Positives = 275/299 (91%)
 Frame = -2

Query: 897  PPQRMLPANSGSHVKASVKVPLDAYMMDFVFSEKEDGGMYDNNYGVDYHIPVSGGVAKEP 718
            PPQ+M PA +G+HV+A+VKVPLDAYMMDFVFSE+EDGG++DN  G+DYHIPV GGVAKEP
Sbjct: 719  PPQKMSPAENGTHVRATVKVPLDAYMMDFVFSEREDGGIFDNKSGMDYHIPVFGGVAKEP 778

Query: 717  PMHIVHISVEMAPIAKVGGLGDVVTSLSRAIQDLGHNIDIILPKYDSLKFDNIKEFHFHR 538
            PMHIVHI+VEMAPIAKVGGLGDVVTSLSRA+QDL HN+DIILPKYD LK +N+K+F FH+
Sbjct: 779  PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLKMNNVKDFRFHK 838

Query: 537  SYFWSGTEIKVWLGIVEGLSVYFLEPQNGMFSAGCVYGCRNDGERFGFFCHAALEFMLQS 358
            +YFW GTEIKVW G VEGLSVYFLEPQNG+FS GCVYGC NDGERFGFFCHAALEF+LQ 
Sbjct: 839  NYFWGGTEIKVWFGKVEGLSVYFLEPQNGLFSKGCVYGCSNDGERFGFFCHAALEFLLQG 898

Query: 357  GLNPDILHCHDWSSAPVAWLFKKHYRHYGLSKARVVFTIHNLEFGAPLIGKAMTYTDKAT 178
            G +PDI+HCHDWSSAPVAWLFK+ Y HYGLSK+R+VFTIHNLEFGA LIG+AMT  DKAT
Sbjct: 899  GFSPDIIHCHDWSSAPVAWLFKEQYTHYGLSKSRIVFTIHNLEFGADLIGRAMTNADKAT 958

Query: 177  TVSQTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPYNDKFIPVPYTSENVVEGKMAA 1
            TVS TYS+EVSGNPVIAPHL+KFHGIVNGIDPDIWDP NDKFIP+PYTSENVVEGK AA
Sbjct: 959  TVSPTYSQEVSGNPVIAPHLHKFHGIVNGIDPDIWDPLNDKFIPIPYTSENVVEGKTAA 1017


>ref|XP_002269011.2| PREDICTED: soluble starch synthase 3, chloroplastic/amyloplastic-like
            [Vitis vinifera]
          Length = 1177

 Score =  539 bits (1389), Expect = e-151
 Identities = 246/299 (82%), Positives = 272/299 (90%)
 Frame = -2

Query: 897  PPQRMLPANSGSHVKASVKVPLDAYMMDFVFSEKEDGGMYDNNYGVDYHIPVSGGVAKEP 718
            PPQ+MLP ++GSH+KA+VKVPLDAYMMDFVFSE+EDGG++DN  G+DYHIPV G V KEP
Sbjct: 668  PPQKMLPVDNGSHLKATVKVPLDAYMMDFVFSEREDGGIFDNRNGMDYHIPVFGSVVKEP 727

Query: 717  PMHIVHISVEMAPIAKVGGLGDVVTSLSRAIQDLGHNIDIILPKYDSLKFDNIKEFHFHR 538
            PMHIVHI+VEMAPIAKVGGLGDVVTSLSRA+Q+L H++DIILPKYD L   N+K+F + R
Sbjct: 728  PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHHVDIILPKYDCLNLSNVKDFQYKR 787

Query: 537  SYFWSGTEIKVWLGIVEGLSVYFLEPQNGMFSAGCVYGCRNDGERFGFFCHAALEFMLQS 358
             YFW GTEIKVW G VEGLSVYFLEPQNG FSAGC+YGCRNDGERFGFFCHAALEF+LQS
Sbjct: 788  CYFWGGTEIKVWFGKVEGLSVYFLEPQNGFFSAGCIYGCRNDGERFGFFCHAALEFLLQS 847

Query: 357  GLNPDILHCHDWSSAPVAWLFKKHYRHYGLSKARVVFTIHNLEFGAPLIGKAMTYTDKAT 178
            G +PDI+HCHDWSSAPV+WLFK HY+HYGLSKARVVFTIHNLEFGAPLI KAM YTDKAT
Sbjct: 848  GFHPDIIHCHDWSSAPVSWLFKDHYKHYGLSKARVVFTIHNLEFGAPLIAKAMVYTDKAT 907

Query: 177  TVSQTYSKEVSGNPVIAPHLYKFHGIVNGIDPDIWDPYNDKFIPVPYTSENVVEGKMAA 1
            TVS TYS+EVSGNP IAPHLYKFHGI+NGID DIWDPYNDKFIPVPY S+NVVEGK AA
Sbjct: 908  TVSHTYSREVSGNPAIAPHLYKFHGILNGIDLDIWDPYNDKFIPVPYISDNVVEGKRAA 966


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