BLASTX nr result

ID: Coptis23_contig00030303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030303
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB55318.1| conserved hypothetical protein [Asparagus officin...   170   1e-40
ref|XP_002438564.1| hypothetical protein SORBIDRAFT_10g022020 [S...   169   2e-40
ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827...   168   4e-40
ref|XP_002443401.1| hypothetical protein SORBIDRAFT_08g018920 [S...   168   5e-40
gb|AAF97981.1|AC000103_31 F21J9.3 [Arabidopsis thaliana]              167   6e-40

>gb|ABB55318.1| conserved hypothetical protein [Asparagus officinalis]
          Length = 324

 Score =  170 bits (430), Expect = 1e-40
 Identities = 74/113 (65%), Positives = 92/113 (81%)
 Frame = +2

Query: 8   TIVLEAVTSYDMWIWHAYFGLPGTNNDVNVLWRSTLFNNLMFGLTPPANYTLMGRNYAIG 187
           TI+LEAV  YD+WIWHAYFG+PGTNND+NVL  S LF+NL  G+ PPA+Y + G+ Y IG
Sbjct: 146 TIILEAVADYDIWIWHAYFGMPGTNNDINVLESSNLFSNLAQGIAPPAHYVIQGKEYNIG 205

Query: 188 YYLTDGIYPKWSTLVKAIKKPRGEREQYFTQMQECYRKDVERAFGVLQKRFAI 346
           YYL DGIYPKW+T+V+ I++P+G +++YF   QE  RKDVERAFGVLQ RFAI
Sbjct: 206 YYLADGIYPKWATIVQTIQQPQGRKKKYFAMKQEACRKDVERAFGVLQSRFAI 258


>ref|XP_002438564.1| hypothetical protein SORBIDRAFT_10g022020 [Sorghum bicolor]
           gi|241916787|gb|EER89931.1| hypothetical protein
           SORBIDRAFT_10g022020 [Sorghum bicolor]
          Length = 326

 Score =  169 bits (429), Expect = 2e-40
 Identities = 78/121 (64%), Positives = 93/121 (76%)
 Frame = +2

Query: 8   TIVLEAVTSYDMWIWHAYFGLPGTNNDVNVLWRSTLFNNLMFGLTPPANYTLMGRNYAIG 187
           TIVLEAV S D+WIWH +FG+PG++ND+NVL RS LF+NL  G  P  N+++ G NY +G
Sbjct: 97  TIVLEAVASDDLWIWHTFFGMPGSHNDINVLNRSPLFDNLAEGKAPEVNFSVNGHNYVMG 156

Query: 188 YYLTDGIYPKWSTLVKAIKKPRGEREQYFTQMQECYRKDVERAFGVLQKRFAIVRGRARL 367
           YYL DGIYP W+TLVK+I KP G + QYF + QE  RK VERAFGVLQ RFAIVRG AR 
Sbjct: 157 YYLADGIYPTWATLVKSITKPMGNKRQYFAKAQEAARKMVERAFGVLQSRFAIVRGAARF 216

Query: 368 W 370
           W
Sbjct: 217 W 217


>ref|XP_003566164.1| PREDICTED: uncharacterized protein LOC100827873 [Brachypodium
           distachyon]
          Length = 423

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/121 (63%), Positives = 91/121 (75%)
 Frame = +2

Query: 8   TIVLEAVTSYDMWIWHAYFGLPGTNNDVNVLWRSTLFNNLMFGLTPPANYTLMGRNYAIG 187
           TIVLEAV S D+WIWH +FG PG+ ND+NVL RS +F  L  G  P  NYT+ G NY +G
Sbjct: 219 TIVLEAVVSLDLWIWHVFFGSPGSLNDINVLHRSPIFTRLAEGQAPQVNYTVNGNNYTMG 278

Query: 188 YYLTDGIYPKWSTLVKAIKKPRGEREQYFTQMQECYRKDVERAFGVLQKRFAIVRGRARL 367
           YYL D IYP+W+TLVK I  P G++ +YF + QE +RKDVERAFGVLQ RFAIVRG ARL
Sbjct: 279 YYLADSIYPQWATLVKTIPSPLGQKNKYFAKCQEAHRKDVERAFGVLQARFAIVRGPARL 338

Query: 368 W 370
           W
Sbjct: 339 W 339


>ref|XP_002443401.1| hypothetical protein SORBIDRAFT_08g018920 [Sorghum bicolor]
           gi|241944094|gb|EES17239.1| hypothetical protein
           SORBIDRAFT_08g018920 [Sorghum bicolor]
          Length = 329

 Score =  168 bits (425), Expect = 5e-40
 Identities = 77/121 (63%), Positives = 93/121 (76%)
 Frame = +2

Query: 8   TIVLEAVTSYDMWIWHAYFGLPGTNNDVNVLWRSTLFNNLMFGLTPPANYTLMGRNYAIG 187
           TIVLEAV S D+WIWHA+FG+PG++ND+NVL RS LF+NL  G  P   +++ G +Y +G
Sbjct: 123 TIVLEAVASNDLWIWHAFFGMPGSHNDINVLHRSPLFDNLAEGKAPEVKFSVNGHDYTMG 182

Query: 188 YYLTDGIYPKWSTLVKAIKKPRGEREQYFTQMQECYRKDVERAFGVLQKRFAIVRGRARL 367
           YYL DGIYP W+TLVK+I KP G + QYF + QE  RK VERAFGVLQ RFAIVRG AR 
Sbjct: 183 YYLADGIYPTWATLVKSITKPMGNKRQYFAKAQEAARKMVERAFGVLQSRFAIVRGSARF 242

Query: 368 W 370
           W
Sbjct: 243 W 243


>gb|AAF97981.1|AC000103_31 F21J9.3 [Arabidopsis thaliana]
          Length = 457

 Score =  167 bits (424), Expect = 6e-40
 Identities = 78/121 (64%), Positives = 91/121 (75%)
 Frame = +2

Query: 8   TIVLEAVTSYDMWIWHAYFGLPGTNNDVNVLWRSTLFNNLMFGLTPPANYTLMGRNYAIG 187
           TI+LEAV  YD+WIWHAYFGLPG+NND+NVL  S LF NL  G  PPA+Y +  + Y + 
Sbjct: 145 TIILEAVADYDLWIWHAYFGLPGSNNDINVLEASHLFANLAEGTAPPASYVINEKPYNMS 204

Query: 188 YYLTDGIYPKWSTLVKAIKKPRGEREQYFTQMQECYRKDVERAFGVLQKRFAIVRGRARL 367
           YYL DGIYPKWSTLV+ I  PRG +++ F   QE  RKDVERAFGVLQ RFAIV G +RL
Sbjct: 205 YYLADGIYPKWSTLVQTIHDPRGPKKKLFAMKQEACRKDVERAFGVLQSRFAIVAGPSRL 264

Query: 368 W 370
           W
Sbjct: 265 W 265


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