BLASTX nr result

ID: Coptis23_contig00030295 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030295
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255...   166   2e-39
ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795...   161   6e-38
ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|2...   158   5e-37
ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789...   156   2e-36
ref|XP_004155251.1| PREDICTED: uncharacterized LOC101204824 [Cuc...   155   2e-36

>ref|XP_002264136.2| PREDICTED: uncharacterized protein LOC100255258 [Vitis vinifera]
          Length = 2572

 Score =  166 bits (419), Expect = 2e-39
 Identities = 87/189 (46%), Positives = 120/189 (63%), Gaps = 18/189 (9%)
 Frame = -1

Query: 515  WSQLHTLESSNTQ-----------------GELLNLDGHTGNILQVAVHPYGSEIELAVS 387
            WS L+T   + TQ                 G  LN+DGH+G ILQVAVHPY  ++ELA S
Sbjct: 472  WSFLYTQAFNGTQDGSINKFTRENILSCCSGATLNIDGHSGKILQVAVHPYSCKVELAAS 531

Query: 386  LDSSGFLLFWSLSKVSSCIFGMPAQVLPSWKLAGKLPTKHWSSVEFSCLSWVPSVLKNFS 207
            LDS+G LL WSLS +S+CI G+ + + P+WKL GK  T+  S  +++ L W PSVL    
Sbjct: 532  LDSNGLLLLWSLSTISNCILGL-STLNPTWKLCGKFATQD-SGSKYTSLHWAPSVLDEDC 589

Query: 206  VLLLASAVGIDCIMIEIAENEVEKVVFHKLCTIPFTGHNHV-EGPTSIFVIPLPSTCRET 30
            +LL+  A GID  +++++++E EKV+ +KLCTIPFT H    +GP ++F IPL S C +T
Sbjct: 590  ILLMGHAGGIDLFIVKVSQSEEEKVICYKLCTIPFTKHGPCQDGPANVFSIPLLSACNKT 649

Query: 29   FTDNHFMLL 3
            F+ N FM L
Sbjct: 650  FSSNKFMFL 658


>ref|XP_003548413.1| PREDICTED: uncharacterized protein LOC100795225 [Glycine max]
          Length = 2369

 Score =  161 bits (407), Expect = 6e-38
 Identities = 81/164 (49%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
 Frame = -1

Query: 491 SSNTQGELLNLDGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMPAQ 312
           SS+  G +LNLDGH+G IL+V++HP  S+++LAVSLDS+G LLFWSLS +S+CI G P  
Sbjct: 468 SSHLTGGVLNLDGHSGRILKVSLHPCTSKVQLAVSLDSNGLLLFWSLSNISNCILGCPT- 526

Query: 311 VLPSWKLAGKLPTKHWSSVEFSCLSWVPSVLKNFSVLLLASAVGIDCIMIEIAENEVEKV 132
           ++P+ +L GKL T+   S+ ++ L+W PS+L +  V  +    GIDC ++ I ++E E +
Sbjct: 527 LVPTMELYGKLATQDSCSL-YTSLTWAPSILDDKLVFFMGHTRGIDCFIVNICQSEEENI 585

Query: 131 VFHKLCTIPFTGHN-HVEGPTSIFVIPLPSTCRETFTDNHFMLL 3
             H LCTIPF+GH  + +GP  IF IPL STC +TF +N  MLL
Sbjct: 586 ECHYLCTIPFSGHGPYEDGPFDIFTIPLNSTCDKTFRNNKLMLL 629


>ref|XP_002302640.1| predicted protein [Populus trichocarpa] gi|222844366|gb|EEE81913.1|
           predicted protein [Populus trichocarpa]
          Length = 2434

 Score =  158 bits (399), Expect = 5e-37
 Identities = 84/164 (51%), Positives = 114/164 (69%), Gaps = 1/164 (0%)
 Frame = -1

Query: 491 SSNTQGELLNLDGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMPAQ 312
           SS + G +LN  GHTG ILQVA+HP+  E+ELAVSLDS G LLFW +S +S+C  G PA+
Sbjct: 476 SSCSSGGVLN-GGHTGKILQVAMHPHIYEVELAVSLDSDGLLLFWIVSTISNCSLG-PAK 533

Query: 311 VLPSWKLAGKLPTKHWSSVEFSCLSWVPSVLKNFSVLLLASAVGIDCIMIEIAENEVEKV 132
           ++P WKL+GKL T + S  +++ L W PS L    VLL+  A GIDC +++I++   E +
Sbjct: 534 LIPGWKLSGKLAT-YDSCSKYTSLRWAPSTLGEDHVLLVGHAGGIDCFIVKISQICKEGI 592

Query: 131 VFHKLCTIPFTGHNHVE-GPTSIFVIPLPSTCRETFTDNHFMLL 3
           + H + TIP TGH   E GPT+IF +PLPS+C +TF  N F+LL
Sbjct: 593 ICHYIGTIPLTGHGPFEDGPTNIFAVPLPSSCNKTFRYNRFLLL 636


>ref|XP_003529883.1| PREDICTED: uncharacterized protein LOC100789935 [Glycine max]
          Length = 2468

 Score =  156 bits (394), Expect = 2e-36
 Identities = 78/164 (47%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
 Frame = -1

Query: 491 SSNTQGELLNLDGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCIFGMPAQ 312
           SS+  G +LNLDGH+G IL+V++HP   +++ A SLDS+G LLFWSLS +S+CI G P  
Sbjct: 467 SSHLTGGVLNLDGHSGKILKVSLHPCTCKVQFAASLDSNGLLLFWSLSNISNCILGCPT- 525

Query: 311 VLPSWKLAGKLPTKHWSSVEFSCLSWVPSVLKNFSVLLLASAVGIDCIMIEIAENEVEKV 132
           ++P+ +L GKL T+   S+ ++ L W PS+L +  V  +    GIDC ++ I ++E E +
Sbjct: 526 LVPTMELCGKLATQDSCSL-YTSLKWAPSILGDKLVFFMGHTRGIDCFIVNICQSEEENI 584

Query: 131 VFHKLCTIPFTGHN-HVEGPTSIFVIPLPSTCRETFTDNHFMLL 3
             H LCTIPF+GH  + +GP  IF IPL STC +TF +N  MLL
Sbjct: 585 ECHYLCTIPFSGHGPYEDGPFDIFTIPLNSTCDKTFRNNKLMLL 628


>ref|XP_004155251.1| PREDICTED: uncharacterized LOC101204824 [Cucumis sativus]
          Length = 2419

 Score =  155 bits (393), Expect = 2e-36
 Identities = 82/170 (48%), Positives = 110/170 (64%), Gaps = 1/170 (0%)
 Frame = -1

Query: 509 QLHTLESSNTQGELLNLDGHTGNILQVAVHPYGSEIELAVSLDSSGFLLFWSLSKVSSCI 330
           +L +L S +   +L NL GH G IL VAVHPY  E+++A SLDS+G LLFWSLS +S+C 
Sbjct: 440 RLESLSSCSFSSQL-NLSGHAGKILHVAVHPYNCEVKIAASLDSNGLLLFWSLSSISNCA 498

Query: 329 FGMPAQVLPSWKLAGKLPTKHWSSVEFSCLSWVPSVLKNFSVLLLASAVGIDCIMIEIAE 150
            G P  + P+W+L GKL T+  S  +++ + W PS+L    +LL+  A GID   + I++
Sbjct: 499 LGSPT-LTPTWELCGKLVTQD-SCSKYTSVQWAPSILDEELILLMGHARGIDFFAVRISQ 556

Query: 149 NEVEKVVFHKLCTIPFTGHNHVE-GPTSIFVIPLPSTCRETFTDNHFMLL 3
           ++ E    H LCTIPFTGH   E GPT+IF I LPS C  T+  N FMLL
Sbjct: 557 SDEENTECHYLCTIPFTGHGPFENGPTNIFSILLPSDCNITYKFNKFMLL 606


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