BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030290
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   207   5e-52
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   206   1e-51
ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   201   5e-50
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   197   7e-49
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   190   9e-47

>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  207 bits (528), Expect = 5e-52
 Identities = 96/127 (75%), Positives = 113/127 (88%)
 Frame = +2

Query: 2   IVPIHDHFTCMIDLLSRAGRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAA 181
           I PI DH+TCMIDLLSRAGRL+EAK FI +MPF PDAIGWATLLSSCRL+ N+EIG+WAA
Sbjct: 504 ITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWAA 563

Query: 182 DSLVKVEPHNPASYVLLSKIYAAKGKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIF 361
           +SL K+EP NPASY+LLS IYAAKGKWDDVA+L+  MR  G++KEPG+SWIK+KNKV+IF
Sbjct: 564 ESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHIF 623

Query: 362 STDDRSN 382
           S DDRS+
Sbjct: 624 SADDRSS 630


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  206 bits (525), Expect = 1e-51
 Identities = 93/127 (73%), Positives = 113/127 (88%)
 Frame = +2

Query: 2   IVPIHDHFTCMIDLLSRAGRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAA 181
           I+PI DH+TCMIDL SRAGRL+EA++FI +MPF PDAIGWA+LLSSCR H N+EIG+WAA
Sbjct: 508 IIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRFHRNMEIGKWAA 567

Query: 182 DSLVKVEPHNPASYVLLSKIYAAKGKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIF 361
           +SL+K+EPHN ASY+LLS IYAAKGKW++VA L+  MR KGLRKEPG SWIK+KN+V+IF
Sbjct: 568 ESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGMRDKGLRKEPGCSWIKYKNQVHIF 627

Query: 362 STDDRSN 382
           S DD+SN
Sbjct: 628 SADDQSN 634


>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  201 bits (511), Expect = 5e-50
 Identities = 89/127 (70%), Positives = 112/127 (88%)
 Frame = +2

Query: 2   IVPIHDHFTCMIDLLSRAGRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAA 181
           IVPI DH+TCMIDL SRAGR++EA+ FI +MPF PDAI WATLLSSCR + N++IG+WAA
Sbjct: 509 IVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAA 568

Query: 182 DSLVKVEPHNPASYVLLSKIYAAKGKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIF 361
           + L++++PHN ASYVLLS +YAAKGKW++VARL+ DMR KGLRKEPG SWIK+KN+V++F
Sbjct: 569 EFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKGLRKEPGCSWIKYKNQVHVF 628

Query: 362 STDDRSN 382
           S DD+SN
Sbjct: 629 SADDKSN 635


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  197 bits (501), Expect = 7e-49
 Identities = 88/127 (69%), Positives = 109/127 (85%)
 Frame = +2

Query: 2   IVPIHDHFTCMIDLLSRAGRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAA 181
           I+P  DH+TCMIDL  RAGRL+EAK FI +MPF PD+IGWATLLSSCRL+ N EIG+WAA
Sbjct: 504 IIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAA 563

Query: 182 DSLVKVEPHNPASYVLLSKIYAAKGKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIF 361
           +SL++++P NPA Y+LLS IYAAKGKW +VA+L+  MR KG RKEPG+SWIK+K+KVYIF
Sbjct: 564 ESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIF 623

Query: 362 STDDRSN 382
           S DD+S+
Sbjct: 624 SADDQSS 630


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  190 bits (483), Expect = 9e-47
 Identities = 86/127 (67%), Positives = 107/127 (84%)
 Frame = +2

Query: 2   IVPIHDHFTCMIDLLSRAGRLQEAKEFIGRMPFQPDAIGWATLLSSCRLHCNVEIGEWAA 181
           I+PI DH TC+IDLL RAGRL+EA+ FI  MP  PD +GWATLLSSCR+H ++EIG+WAA
Sbjct: 504 IMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAA 563

Query: 182 DSLVKVEPHNPASYVLLSKIYAAKGKWDDVARLKYDMRHKGLRKEPGYSWIKFKNKVYIF 361
           DSL+ +EP NPASYVLLS +YA+KGKWD VA+L+  MR K +RKEPGYSWIK+K KV++F
Sbjct: 564 DSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVF 623

Query: 362 STDDRSN 382
           S DD+S+
Sbjct: 624 SADDQSS 630