BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030284
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-35
ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
emb|CBI31119.3| unnamed protein product [Vitis vinifera]              147   1e-33
gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsu...   137   7e-31
gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]        115   3e-24

>ref|XP_002327460.1| predicted protein [Populus trichocarpa] gi|222836014|gb|EEE74435.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  151 bits (381), Expect = 6e-35
 Identities = 72/105 (68%), Positives = 88/105 (83%)
 Frame = -1

Query: 477 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASEN*WEDVAKVRKDMENKNVRKVP 298
           CR+HGDV+LG+E VDSL+QR LDHGGVHVLLSN+YAS + WED +K+RK ME+KN+RK+P
Sbjct: 423 CRVHGDVQLGEEMVDSLVQRCLDHGGVHVLLSNMYASADKWEDASKIRKKMEDKNIRKLP 482

Query: 297 GCSSIEVDGVVCKFVAGDRSHFLMEDITSLLVVIKTQLKAVGLDD 163
           GCSSIEV+G VC+FV GDRS+ L EDI  LL  I  QLK++ LDD
Sbjct: 483 GCSSIEVNGTVCEFVTGDRSYALEEDIMFLLFGIDKQLKSLFLDD 527


>ref|XP_002265420.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 537

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/105 (68%), Positives = 84/105 (80%)
 Frame = -1

Query: 477 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASEN*WEDVAKVRKDMENKNVRKVP 298
           CR+HGDVELGKETV+ L +RSLDHGGVHVLLSN+YAS N WEDVAKVRK ME K V+KVP
Sbjct: 424 CRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVP 483

Query: 297 GCSSIEVDGVVCKFVAGDRSHFLMEDITSLLVVIKTQLKAVGLDD 163
           GCS IEVDG V +FVAGD SH  M++I  LL+ I   LK++  +D
Sbjct: 484 GCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKSLWSED 528


>emb|CBI31119.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  147 bits (370), Expect = 1e-33
 Identities = 72/105 (68%), Positives = 84/105 (80%)
 Frame = -1

Query: 477 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASEN*WEDVAKVRKDMENKNVRKVP 298
           CR+HGDVELGKETV+ L +RSLDHGGVHVLLSN+YAS N WEDVAKVRK ME K V+KVP
Sbjct: 399 CRVHGDVELGKETVECLAERSLDHGGVHVLLSNMYASANQWEDVAKVRKGMEEKKVKKVP 458

Query: 297 GCSSIEVDGVVCKFVAGDRSHFLMEDITSLLVVIKTQLKAVGLDD 163
           GCS IEVDG V +FVAGD SH  M++I  LL+ I   LK++  +D
Sbjct: 459 GCSLIEVDGAVFEFVAGDMSHVFMDEIVLLLLGIDKHLKSLWSED 503


>gb|ACP39950.1| pentatricopeptide repeat protein [Gossypium hirsutum]
           gi|227462998|gb|ACP39951.1| pentatricopeptide repeat
           protein [Gossypium hirsutum]
          Length = 532

 Score =  137 bits (346), Expect = 7e-31
 Identities = 67/112 (59%), Positives = 86/112 (76%)
 Frame = -1

Query: 477 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASEN*WEDVAKVRKDMENKNVRKVP 298
           CR+HGDVELGKETV+SL++R LDHGGVHVLLSN+YAS N W+ V KVRK+M  K V+KVP
Sbjct: 419 CRVHGDVELGKETVESLVERGLDHGGVHVLLSNMYASSNQWDWVVKVRKEMGAKKVKKVP 478

Query: 297 GCSSIEVDGVVCKFVAGDRSHFLMEDITSLLVVIKTQLKAVGLDDGVITELI 142
           GCSSIE+DG V +F+AGD S+  +ED+  +L+ I   LK + L D   + +I
Sbjct: 479 GCSSIEIDGSVSEFIAGDMSYLRVEDVMLVLLGIDNHLKFLLLADDTNSNMI 530


>gb|AFW74147.1| hypothetical protein ZEAMMB73_269656 [Zea mays]
          Length = 524

 Score =  115 bits (289), Expect = 3e-24
 Identities = 58/104 (55%), Positives = 71/104 (68%)
 Frame = -1

Query: 477 CRMHGDVELGKETVDSLMQRSLDHGGVHVLLSNLYASEN*WEDVAKVRKDMENKNVRKVP 298
           C  HGDVE G++ V  L +  LDH GVHV LSN+YA    WE+V KVR+DME + V KVP
Sbjct: 408 CAAHGDVEAGEQVVRWLAELGLDHSGVHVQLSNMYAGWGKWEEVLKVRRDMEERRVAKVP 467

Query: 297 GCSSIEVDGVVCKFVAGDRSHFLMEDITSLLVVIKTQLKAVGLD 166
           GCS +EV GVVC+FVAGDRSH LM +I S    +  QL+ +  D
Sbjct: 468 GCSMLEVGGVVCEFVAGDRSHPLMPEIMSASRDLHGQLRQLDHD 511