BLASTX nr result

ID: Coptis23_contig00030275 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030275
         (212 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281489.1| PREDICTED: uncharacterized protein LOC100255...    64   1e-08
dbj|BAD73388.1| RabGAP/TBC domain-containing protein-like [Oryza...    63   2e-08
gb|EEE55636.1| hypothetical protein OsJ_03987 [Oryza sativa Japo...    63   2e-08
gb|EAY76404.1| hypothetical protein OsI_04332 [Oryza sativa Indi...    63   2e-08
ref|XP_002525202.1| run and tbc1 domain containing 3, plant, put...    62   4e-08

>ref|XP_002281489.1| PREDICTED: uncharacterized protein LOC100255322 [Vitis vinifera]
           gi|297736455|emb|CBI25326.3| unnamed protein product
           [Vitis vinifera]
          Length = 830

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = +2

Query: 89  TFEQHHNRDAYGFALRPQHLQRYREYATIYKXXXXXRSEKW 211
           TFE  H RDAYGFA+RPQHLQRYREYA IYK     RSE+W
Sbjct: 12  TFE--HKRDAYGFAVRPQHLQRYREYANIYKEEEEERSERW 50


>dbj|BAD73388.1| RabGAP/TBC domain-containing protein-like [Oryza sativa Japonica
           Group]
          Length = 843

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 104 HNRDAYGFALRPQHLQRYREYATIYKXXXXXRSEKW 211
           H RDAYGFA+RPQHLQRYREYA IYK     RSE+W
Sbjct: 13  HKRDAYGFAVRPQHLQRYREYANIYKEEEEERSERW 48


>gb|EEE55636.1| hypothetical protein OsJ_03987 [Oryza sativa Japonica Group]
          Length = 854

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 104 HNRDAYGFALRPQHLQRYREYATIYKXXXXXRSEKW 211
           H RDAYGFA+RPQHLQRYREYA IYK     RSE+W
Sbjct: 13  HKRDAYGFAVRPQHLQRYREYANIYKEEEEERSERW 48



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/46 (58%), Positives = 31/46 (67%)
 Frame = +2

Query: 74  KDHSTTFEQHHNRDAYGFALRPQHLQRYREYATIYKXXXXXRSEKW 211
           +D     +    RDAYGFA+RPQHLQRYREYA IYK     RSE+W
Sbjct: 75  EDEEAGKKAEDGRDAYGFAVRPQHLQRYREYANIYKEEEEERSERW 120


>gb|EAY76404.1| hypothetical protein OsI_04332 [Oryza sativa Indica Group]
          Length = 824

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 29/36 (80%)
 Frame = +2

Query: 104 HNRDAYGFALRPQHLQRYREYATIYKXXXXXRSEKW 211
           H RDAYGFA+RPQHLQRYREYA IYK     RSE+W
Sbjct: 13  HKRDAYGFAVRPQHLQRYREYANIYKEEEEERSERW 48


>ref|XP_002525202.1| run and tbc1 domain containing 3, plant, putative [Ricinus
           communis] gi|223535499|gb|EEF37168.1| run and tbc1
           domain containing 3, plant, putative [Ricinus communis]
          Length = 894

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/52 (57%), Positives = 33/52 (63%)
 Frame = +2

Query: 56  MTNHNNKDHSTTFEQHHNRDAYGFALRPQHLQRYREYATIYKXXXXXRSEKW 211
           M   N   H T  +  H RDAYGFALRPQH+QRYREY  IYK     R+EKW
Sbjct: 1   MAEDNFNLHRTILQ--HTRDAYGFALRPQHVQRYREYLNIYKEEEEERAEKW 50


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