BLASTX nr result

ID: Coptis23_contig00030262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030262
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase ...   478   e-132
ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyl...   464   e-128
ref|XP_002315941.1| homocysteine s-methyltransferase [Populus tr...   459   e-127
ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase ...   456   e-126
ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyr...   451   e-124

>ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera]
            gi|297737821|emb|CBI27022.3| unnamed protein product
            [Vitis vinifera]
          Length = 325

 Score =  478 bits (1230), Expect = e-132
 Identities = 228/272 (83%), Positives = 251/272 (92%)
 Frame = -3

Query: 1121 LIKKVHLEYLEAGADIVVTSSYQATLPGFLSRGLSMEEGERLLQKSVELALEARDKFWEA 942
            LIK+VHLEYLEAGADI+VTSSYQAT+PGFLS+GLS+EEGE LL++SV LA+EARDKFW+ 
Sbjct: 52   LIKRVHLEYLEAGADILVTSSYQATIPGFLSKGLSIEEGELLLERSVRLAVEARDKFWDV 111

Query: 941  IENVPEHRYNRALVAASIGSYGAYLADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGP 762
             + VP H YNRALVAASIGSYGAYLADGSEYSG YG D+NLDKLKDFHRRRLQVLV + P
Sbjct: 112  TKRVPGHGYNRALVAASIGSYGAYLADGSEYSGCYGPDMNLDKLKDFHRRRLQVLVRSCP 171

Query: 761  DLLAFETIPNKLETQACLELLDEENIQIPSWICFSSVDGEHAASGESFKECLDVINKSNK 582
            DLLAFETIPNKLE QAC+ELL+EEN+QIPSWICFSSVDGE+A SGESFKECLD+INKS K
Sbjct: 172  DLLAFETIPNKLEAQACVELLEEENVQIPSWICFSSVDGENAPSGESFKECLDIINKSKK 231

Query: 581  VNVVGINCTPPHFIENLICKFRELTEKPIVVYPNSGEVWDGRDKRWLPSKCFGDGKFEHY 402
            VN VGINC PPHF+E+LICKF+ELTEKPIVVYPNSGEVWDGR KRWLPSKCFGD KFE Y
Sbjct: 232  VNAVGINCAPPHFLESLICKFKELTEKPIVVYPNSGEVWDGRAKRWLPSKCFGDDKFELY 291

Query: 401  AARWRDLGAKLIGGCCRTTPSTIQAISNVLKK 306
            A +WRDLGAKLIGGCCRTTPSTI+AIS VLK+
Sbjct: 292  ATKWRDLGAKLIGGCCRTTPSTIRAISKVLKE 323


>ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
            [Ricinus communis] gi|223528747|gb|EEF30757.1|
            5-methyltetrahydrofolate:homocysteine methyltransferase,
            putative [Ricinus communis]
          Length = 327

 Score =  464 bits (1193), Expect = e-128
 Identities = 220/273 (80%), Positives = 249/273 (91%)
 Frame = -3

Query: 1124 QLIKKVHLEYLEAGADIVVTSSYQATLPGFLSRGLSMEEGERLLQKSVELALEARDKFWE 945
            +LIK+VHLEYLEAGADI+VTSSYQATLPGF+S+GL++EEGE LL+KSV+LA+EARDKFW+
Sbjct: 53   ELIKRVHLEYLEAGADILVTSSYQATLPGFMSKGLTIEEGELLLKKSVKLAIEARDKFWD 112

Query: 944  AIENVPEHRYNRALVAASIGSYGAYLADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAG 765
            A++  P HRYNRALVAASIGSYGAYLADGSEYSG YG DVNL+KLKDFHR RLQVL EAG
Sbjct: 113  AVKRNPLHRYNRALVAASIGSYGAYLADGSEYSGYYGPDVNLEKLKDFHRHRLQVLAEAG 172

Query: 764  PDLLAFETIPNKLETQACLELLDEENIQIPSWICFSSVDGEHAASGESFKECLDVINKSN 585
            PDLLAFETIPNKLE +AC+ELL+EENI+IPSWICFSSVDGE+A SGESF+ECLDVINKSN
Sbjct: 173  PDLLAFETIPNKLEAEACVELLEEENIKIPSWICFSSVDGENAPSGESFQECLDVINKSN 232

Query: 584  KVNVVGINCTPPHFIENLICKFRELTEKPIVVYPNSGEVWDGRDKRWLPSKCFGDGKFEH 405
            KV   GINC PPHFIE+LICKF++LT+K +VVYPNSGE+WDGR KRWLPS CF D KFE 
Sbjct: 233  KVVAAGINCAPPHFIESLICKFKKLTQKFVVVYPNSGEIWDGRAKRWLPSACFNDDKFEF 292

Query: 404  YAARWRDLGAKLIGGCCRTTPSTIQAISNVLKK 306
            +A RW DLGA LIGGCCRTTPSTI+AIS VLK+
Sbjct: 293  FATRWHDLGANLIGGCCRTTPSTIRAISKVLKE 325


>ref|XP_002315941.1| homocysteine s-methyltransferase [Populus trichocarpa]
            gi|222864981|gb|EEF02112.1| homocysteine
            s-methyltransferase [Populus trichocarpa]
          Length = 329

 Score =  459 bits (1181), Expect = e-127
 Identities = 223/271 (82%), Positives = 243/271 (89%)
 Frame = -3

Query: 1121 LIKKVHLEYLEAGADIVVTSSYQATLPGFLSRGLSMEEGERLLQKSVELALEARDKFWEA 942
            LIK+VHLEYLEAGADI+VTSSYQATLPGFLSRGLS EEGE LL+KSV LA+EAR+KFW+A
Sbjct: 54   LIKRVHLEYLEAGADILVTSSYQATLPGFLSRGLSAEEGELLLKKSVTLAVEARNKFWDA 113

Query: 941  IENVPEHRYNRALVAASIGSYGAYLADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGP 762
            +E  P H YNRALVAASIGSYGAYLADGSEYSG YG DVNL+KLKDFHRRRLQVLV+A P
Sbjct: 114  VERNPGHSYNRALVAASIGSYGAYLADGSEYSGCYGPDVNLEKLKDFHRRRLQVLVKASP 173

Query: 761  DLLAFETIPNKLETQACLELLDEENIQIPSWICFSSVDGEHAASGESFKECLDVINKSNK 582
            DLLAFETIPNKLE QAC+ELL+EENI IPSWICFS VDGE+A SGESF++CL+ INKS++
Sbjct: 174  DLLAFETIPNKLEAQACVELLEEENINIPSWICFSCVDGENAPSGESFQQCLEAINKSDR 233

Query: 581  VNVVGINCTPPHFIENLICKFRELTEKPIVVYPNSGEVWDGRDKRWLPSKCFGDGKFEHY 402
            V  VGINC PPHFIE+LICKF+ELTEK IVVYPNSGEVWDGR KRWLPS CF D KFE +
Sbjct: 234  VKAVGINCAPPHFIESLICKFKELTEKLIVVYPNSGEVWDGRAKRWLPSTCFDDDKFEVF 293

Query: 401  AARWRDLGAKLIGGCCRTTPSTIQAISNVLK 309
            A RW DLGA LIGGCCRTTPSTIQAIS VLK
Sbjct: 294  ATRWHDLGASLIGGCCRTTPSTIQAISKVLK 324


>ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis sativus]
            gi|449493450|ref|XP_004159294.1| PREDICTED: homocysteine
            S-methyltransferase 1-like [Cucumis sativus]
          Length = 328

 Score =  456 bits (1174), Expect = e-126
 Identities = 216/273 (79%), Positives = 248/273 (90%)
 Frame = -3

Query: 1121 LIKKVHLEYLEAGADIVVTSSYQATLPGFLSRGLSMEEGERLLQKSVELALEARDKFWEA 942
            LIKKVHLEYLEAGADI+V+SSYQAT+PGF+S+GLS+EEGE LL+KSV+LA+EARD FW++
Sbjct: 54   LIKKVHLEYLEAGADILVSSSYQATIPGFISKGLSVEEGELLLEKSVKLAIEARDSFWDS 113

Query: 941  IENVPEHRYNRALVAASIGSYGAYLADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGP 762
            ++ +P H+YNRALVAASIGSYGAYLADGSEYSG YG DVN+DKLKDFHRRRLQ+ V+A P
Sbjct: 114  VKCIPGHKYNRALVAASIGSYGAYLADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASP 173

Query: 761  DLLAFETIPNKLETQACLELLDEENIQIPSWICFSSVDGEHAASGESFKECLDVINKSNK 582
            DLLAFETIPNKLE QAC+ELL+EENIQIPSWICFSSVDGE+A SGESF++CL  INKS+K
Sbjct: 174  DLLAFETIPNKLEAQACVELLEEENIQIPSWICFSSVDGENAPSGESFEKCLYAINKSDK 233

Query: 581  VNVVGINCTPPHFIENLICKFRELTEKPIVVYPNSGEVWDGRDKRWLPSKCFGDGKFEHY 402
            VN VGINCTPPHFIE LI KF+ELT K IVVYPNSGEVWDGR K+WLPS CFGD KFE  
Sbjct: 234  VNAVGINCTPPHFIEALITKFKELTNKHIVVYPNSGEVWDGRFKKWLPSNCFGDDKFESL 293

Query: 401  AARWRDLGAKLIGGCCRTTPSTIQAISNVLKKS 303
            ++RWR+LGA  IGGCCRTTPSTI+A+S VLK+S
Sbjct: 294  SSRWRNLGATFIGGCCRTTPSTIRAVSKVLKES 326


>ref|XP_002875290.1| ATHMT-1/HMT-1 [Arabidopsis lyrata subsp. lyrata]
            gi|297321128|gb|EFH51549.1| ATHMT-1/HMT-1 [Arabidopsis
            lyrata subsp. lyrata]
          Length = 326

 Score =  451 bits (1161), Expect = e-124
 Identities = 213/273 (78%), Positives = 245/273 (89%)
 Frame = -3

Query: 1124 QLIKKVHLEYLEAGADIVVTSSYQATLPGFLSRGLSMEEGERLLQKSVELALEARDKFWE 945
            +LIK+VH+EYLEAGADIVVTSSYQAT+PGFLSRGL++EE E LLQKSV+LA+EARD+FW+
Sbjct: 53   ELIKRVHMEYLEAGADIVVTSSYQATIPGFLSRGLAIEESESLLQKSVQLAVEARDRFWD 112

Query: 944  AIENVPEHRYNRALVAASIGSYGAYLADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAG 765
             +  V  H YNRALVAASIGSYGAYLADGSEYSG YG +V+LDKLKDFHRRRLQVLVEAG
Sbjct: 113  KVSKVSGHSYNRALVAASIGSYGAYLADGSEYSGYYGENVSLDKLKDFHRRRLQVLVEAG 172

Query: 764  PDLLAFETIPNKLETQACLELLDEENIQIPSWICFSSVDGEHAASGESFKECLDVINKSN 585
            PDLLAFETIPNKLE QAC+ELL+EE +QIP+WICF+SVDGE A SGESF+ECL+ +NKSN
Sbjct: 173  PDLLAFETIPNKLEAQACVELLEEEKVQIPAWICFTSVDGEKAPSGESFEECLEALNKSN 232

Query: 584  KVNVVGINCTPPHFIENLICKFRELTEKPIVVYPNSGEVWDGRDKRWLPSKCFGDGKFEH 405
             +  VGINC PP FIENLICKF +LT+K IVVYPNSGEVWDG+ K+WLPS+CFGD +FE 
Sbjct: 233  NIYAVGINCAPPQFIENLICKFAKLTKKAIVVYPNSGEVWDGKAKQWLPSQCFGDDEFEM 292

Query: 404  YAARWRDLGAKLIGGCCRTTPSTIQAISNVLKK 306
            +A +WRDLGAKLIGGCCRTTPSTI+AIS  LK+
Sbjct: 293  FATKWRDLGAKLIGGCCRTTPSTIKAISKDLKR 325


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