BLASTX nr result

ID: Coptis23_contig00030250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030250
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270567.2| PREDICTED: uncharacterized protein LOC100260...   358   4e-97
ref|XP_002515280.1| conserved hypothetical protein [Ricinus comm...   354   1e-95
ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|2...   336   2e-90
dbj|BAK07580.1| predicted protein [Hordeum vulgare subsp. vulgare]    335   5e-90
ref|XP_003561699.1| PREDICTED: uncharacterized protein LOC100826...   333   2e-89

>ref|XP_002270567.2| PREDICTED: uncharacterized protein LOC100260535 [Vitis vinifera]
          Length = 563

 Score =  358 bits (920), Expect = 4e-97
 Identities = 163/209 (77%), Positives = 186/209 (88%)
 Frame = -3

Query: 699 HFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTAHWWAHYKTKSGVNYYQEG 520
           HFLVHEGKARV QKRVQTLRID+IDR SSRW+GADI+VFNTAHWW+H+KTK+GVNYYQEG
Sbjct: 350 HFLVHEGKARVGQKRVQTLRIDSIDRGSSRWRGADIVVFNTAHWWSHFKTKAGVNYYQEG 409

Query: 519 DQVHPYLDASTAFRRALTTWASWVDKHIPPGKTKVFFRSSAPSHFRGGQWNSGGHCKDGS 340
           +QV+  LD  TAFR+ALTTWASWVDK+I PGKT+VFFRSSAPS+FRGGQWNSGGHCK+ +
Sbjct: 410 NQVYARLDVLTAFRKALTTWASWVDKYINPGKTRVFFRSSAPSYFRGGQWNSGGHCKEAT 469

Query: 339 KPLNDTLNTYYPEKNFIAEEVIKEMSTPVILLNITGLSGYRIDGHPSIYGKKPGKPSLYT 160
           +PLN+T N  YPEK+ IAEEVIK+M TPV  LNIT LS YRIDGHPSI+G+KP K    +
Sbjct: 470 QPLNETFNFDYPEKSIIAEEVIKQMKTPVTFLNITSLSQYRIDGHPSIFGRKPEKAYSSS 529

Query: 159 VQDCSHWCLPGVPDTWNELLYFYLQSGRK 73
           +QDCSHWCLPGVPDTWNELLYF+LQS RK
Sbjct: 530 IQDCSHWCLPGVPDTWNELLYFHLQSTRK 558


>ref|XP_002515280.1| conserved hypothetical protein [Ricinus communis]
           gi|223545760|gb|EEF47264.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 563

 Score =  354 bits (908), Expect = 1e-95
 Identities = 159/210 (75%), Positives = 181/210 (86%)
 Frame = -3

Query: 699 HFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTAHWWAHYKTKSGVNYYQEG 520
           HFLVHE KARV QKRVQTLRIDAID  SSRW+GADIL+FNTAHWW+H+KTK+G+NYYQEG
Sbjct: 351 HFLVHESKARVGQKRVQTLRIDAIDHGSSRWRGADILIFNTAHWWSHFKTKAGINYYQEG 410

Query: 519 DQVHPYLDASTAFRRALTTWASWVDKHIPPGKTKVFFRSSAPSHFRGGQWNSGGHCKDGS 340
           +QVHP LD STAFRRAL TWASWVD+HI P KT+VFFRSSAPSHFRGGQWNSGGHCK+ +
Sbjct: 411 NQVHPKLDVSTAFRRALMTWASWVDRHINPRKTQVFFRSSAPSHFRGGQWNSGGHCKEAT 470

Query: 339 KPLNDTLNTYYPEKNFIAEEVIKEMSTPVILLNITGLSGYRIDGHPSIYGKKPGKPSLYT 160
           +PLN+T    +PEKN I E++IK M+TPV  LNIT LS +RIDGHPSIYGK P K    +
Sbjct: 471 EPLNETSGVAFPEKNTITEDIIKHMTTPVTFLNITSLSEFRIDGHPSIYGKTPTKRYTSS 530

Query: 159 VQDCSHWCLPGVPDTWNELLYFYLQSGRKD 70
            QDCSHWCLPG+PDTWNELLYF+LQS R+D
Sbjct: 531 GQDCSHWCLPGIPDTWNELLYFHLQSKRRD 560


>ref|XP_002301513.1| predicted protein [Populus trichocarpa] gi|222843239|gb|EEE80786.1|
           predicted protein [Populus trichocarpa]
          Length = 492

 Score =  336 bits (862), Expect = 2e-90
 Identities = 151/206 (73%), Positives = 171/206 (83%)
 Frame = -3

Query: 699 HFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTAHWWAHYKTKSGVNYYQEG 520
           HFLVHE KAR+  +RVQTLRIDAID  SSRW+GADIL+FNTAHWW+H+KTK+G+NYYQEG
Sbjct: 276 HFLVHESKARIGSRRVQTLRIDAIDHGSSRWRGADILIFNTAHWWSHFKTKAGINYYQEG 335

Query: 519 DQVHPYLDASTAFRRALTTWASWVDKHIPPGKTKVFFRSSAPSHFRGGQWNSGGHCKDGS 340
           +QVHP LD S AFRRAL TWASWVD+HI P KT+VFFRSSAPSHFRGGQWNSGG C   +
Sbjct: 336 NQVHPQLDVSIAFRRALMTWASWVDRHINPRKTRVFFRSSAPSHFRGGQWNSGGQCMGAT 395

Query: 339 KPLNDTLNTYYPEKNFIAEEVIKEMSTPVILLNITGLSGYRIDGHPSIYGKKPGKPSLYT 160
           +PLN+T +T Y EKN I EE IK M TPV  LNITG SG+R DGHPSIYGK+PGK    +
Sbjct: 396 QPLNETSSTGYSEKNSIVEETIKHMKTPVTFLNITGFSGFRTDGHPSIYGKRPGKRYASS 455

Query: 159 VQDCSHWCLPGVPDTWNELLYFYLQS 82
           +QDCSHWCLPGVPDTWNE L  +L S
Sbjct: 456 IQDCSHWCLPGVPDTWNEFLSSHLLS 481


>dbj|BAK07580.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 650

 Score =  335 bits (859), Expect = 5e-90
 Identities = 148/209 (70%), Positives = 177/209 (84%)
 Frame = -3

Query: 699  HFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTAHWWAHYKTKSGVNYYQEG 520
            HFLVHEGK+R++QKR +TLRID IDRSSSRWKGA++LVFNTAHWW+H+KTK+G+NYYQEG
Sbjct: 440  HFLVHEGKSRIRQKRTRTLRIDTIDRSSSRWKGANVLVFNTAHWWSHHKTKAGLNYYQEG 499

Query: 519  DQVHPYLDASTAFRRALTTWASWVDKHIPPGKTKVFFRSSAPSHFRGGQWNSGGHCKDGS 340
            D VHP+LDASTAF RALTTWASWVD++I P KT+VFFRSS+PSHF GG+WNSGGHC++ +
Sbjct: 500  DNVHPHLDASTAFHRALTTWASWVDRYIDPWKTQVFFRSSSPSHFSGGEWNSGGHCREST 559

Query: 339  KPLNDTLNTYYPEKNFIAEEVIKEMSTPVILLNITGLSGYRIDGHPSIYGKKPGKPSLYT 160
             PLNDT     PE+N I E+V K+M TPV +LNIT LSG RIDGHPS+YG K G  +  +
Sbjct: 560  MPLNDTHARPVPERNAILEQVAKQMKTPVTILNITNLSGLRIDGHPSVYGSKAGDLTASS 619

Query: 159  VQDCSHWCLPGVPDTWNELLYFYLQSGRK 73
             QDCSHWCLPGVPDTWNELL ++L S  +
Sbjct: 620  TQDCSHWCLPGVPDTWNELLLYHLVSSHE 648


>ref|XP_003561699.1| PREDICTED: uncharacterized protein LOC100826101 [Brachypodium
            distachyon]
          Length = 659

 Score =  333 bits (855), Expect = 2e-89
 Identities = 148/209 (70%), Positives = 178/209 (85%)
 Frame = -3

Query: 699  HFLVHEGKARVKQKRVQTLRIDAIDRSSSRWKGADILVFNTAHWWAHYKTKSGVNYYQEG 520
            HFLVHEGK+R+ QKR +TLRID IDRSSSRW+GA++LVFNTAHWW+H+KTK+GVNYYQEG
Sbjct: 446  HFLVHEGKSRIGQKRTRTLRIDTIDRSSSRWRGANVLVFNTAHWWSHHKTKAGVNYYQEG 505

Query: 519  DQVHPYLDASTAFRRALTTWASWVDKHIPPGKTKVFFRSSAPSHFRGGQWNSGGHCKDGS 340
            D VHP+LD STAF RALTTWASWVD++I P KT+VFFRSS+PSHF GG+WNSGGHCK+ +
Sbjct: 506  DTVHPHLDVSTAFHRALTTWASWVDRYINPRKTQVFFRSSSPSHFSGGEWNSGGHCKEST 565

Query: 339  KPLNDTLNTYYPEKNFIAEEVIKEMSTPVILLNITGLSGYRIDGHPSIYGKKPGKPSLYT 160
             PLNDT     PE+N I E+V K+M TPV ++NIT LSG RIDGHPSIYG+K G  +  +
Sbjct: 566  TPLNDTRARPVPERNAIFEQVTKQMRTPVTIMNITNLSGLRIDGHPSIYGRKAGDLTTSS 625

Query: 159  VQDCSHWCLPGVPDTWNELLYFYLQSGRK 73
             QDCSHWCLPGVPDTWNELL+++L S ++
Sbjct: 626  SQDCSHWCLPGVPDTWNELLFYHLVSSQE 654


Top