BLASTX nr result

ID: Coptis23_contig00030209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030209
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...    69   3e-10
ref|XP_004136181.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...    69   3e-10
ref|XP_002520657.1| Homeobox protein LUMINIDEPENDENS, putative [...    66   3e-09
ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-...    65   4e-09
gb|ADV56700.1| homeobox protein [Phaseolus vulgaris]                   65   7e-09

>ref|XP_004160562.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Cucumis sativus]
          Length = 438

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = -2

Query: 143 TDINIGNSIDSFSKFLEYQKDLFHSQIHQLQNIVVTQCRLTAVNPLS 3
           +++ IG+S DSF KFL+ QKDLF SQ+ QLQ IVVTQC+LT VNPLS
Sbjct: 9   SNLEIGSSFDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLS 55


>ref|XP_004136181.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Cucumis sativus]
          Length = 1049

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = -2

Query: 143 TDINIGNSIDSFSKFLEYQKDLFHSQIHQLQNIVVTQCRLTAVNPLS 3
           +++ IG+S DSF KFL+ QKDLF SQ+ QLQ IVVTQC+LT VNPLS
Sbjct: 9   SNLEIGSSFDSFQKFLDSQKDLFRSQVDQLQTIVVTQCKLTGVNPLS 55


>ref|XP_002520657.1| Homeobox protein LUMINIDEPENDENS, putative [Ricinus communis]
           gi|223540042|gb|EEF41619.1| Homeobox protein
           LUMINIDEPENDENS, putative [Ricinus communis]
          Length = 1021

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = -2

Query: 146 LTDINIGNSIDSFSKFLEYQKDLFHSQIHQLQNIVVTQCRLTAVNPLS 3
           L +I IG S+ SF K L+ QK+LFH QI QLQ IVVTQC+LT VNPLS
Sbjct: 4   LEEIEIGTSVVSFQKILDSQKELFHCQIDQLQRIVVTQCKLTGVNPLS 51


>ref|XP_003553647.1| PREDICTED: homeobox protein LUMINIDEPENDENS-like [Glycine max]
          Length = 1024

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/45 (68%), Positives = 36/45 (80%)
 Frame = -2

Query: 137 INIGNSIDSFSKFLEYQKDLFHSQIHQLQNIVVTQCRLTAVNPLS 3
           + IG+S +SF KFL  QK+LFHSQI Q Q IVVTQC+LT VNPLS
Sbjct: 11  LEIGSSAESFQKFLVSQKELFHSQIDQFQEIVVTQCKLTGVNPLS 55


>gb|ADV56700.1| homeobox protein [Phaseolus vulgaris]
          Length = 909

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/43 (72%), Positives = 35/43 (81%)
 Frame = -2

Query: 131 IGNSIDSFSKFLEYQKDLFHSQIHQLQNIVVTQCRLTAVNPLS 3
           IG+S +SF KFL  Q+DLFHSQI Q Q IVVTQC+LT VNPLS
Sbjct: 13  IGSSAESFQKFLLSQRDLFHSQIDQFQEIVVTQCKLTGVNPLS 55


Top