BLASTX nr result

ID: Coptis23_contig00030185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030185
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276374.2| PREDICTED: extended synaptotagmin-2-like [Vi...   209   4e-52
emb|CBI32744.3| unnamed protein product [Vitis vinifera]              209   4e-52
gb|EEE66239.1| hypothetical protein OsJ_22411 [Oryza sativa Japo...   208   8e-52
gb|EEC81201.1| hypothetical protein OsI_24227 [Oryza sativa Indi...   207   2e-51
ref|XP_002437472.1| plant synaptotagmin [Sorghum bicolor] gi|241...   205   9e-51

>ref|XP_002276374.2| PREDICTED: extended synaptotagmin-2-like [Vitis vinifera]
          Length = 546

 Score =  209 bits (533), Expect = 4e-52
 Identities = 101/183 (55%), Positives = 129/183 (70%)
 Frame = -2

Query: 727 FRLDLLKSIDPNKSQSKKKRGQLVVELAFNPFRXXXXXXXXXXXGYTRMENGSGGVSEXX 548
           F LDLLK+ +PN   +KK RG++VVE+ FNPF+            + R ++G    +E  
Sbjct: 362 FTLDLLKNTNPNDPHNKKYRGKIVVEMTFNPFKEDSERFSGLLNEHMRNDSGGERATEDV 421

Query: 547 XXXXXXXXXXXXXXAEDVEGKRHNNPYALVIFRGEERETKMIKKTRDPCWDEEFHYMLEE 368
                         AE VEGK HNNPYA+++F+GE + TK+IKKTRDPCW+EEF +MLEE
Sbjct: 422 PSSGAGLLLVVIQGAEHVEGKHHNNPYAIILFKGERKNTKLIKKTRDPCWNEEFEFMLEE 481

Query: 367 APVNDKIHIEVLSKRTVFGFQFKESLGHVGINLIDVVNNGRINEKYHLINSKNGVIHVEI 188
           APV +KIHIEV+SKR  FGF FKESLGHV I+LIDVV+NG IN+KY+LI SK+GVIHV +
Sbjct: 482 APVKEKIHIEVMSKRKGFGFSFKESLGHVDIDLIDVVHNGHINKKYNLIRSKHGVIHVGL 541

Query: 187 RWR 179
           RW+
Sbjct: 542 RWK 544


>emb|CBI32744.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  209 bits (533), Expect = 4e-52
 Identities = 101/183 (55%), Positives = 129/183 (70%)
 Frame = -2

Query: 727 FRLDLLKSIDPNKSQSKKKRGQLVVELAFNPFRXXXXXXXXXXXGYTRMENGSGGVSEXX 548
           F LDLLK+ +PN   +KK RG++VVE+ FNPF+            + R ++G    +E  
Sbjct: 363 FTLDLLKNTNPNDPHNKKYRGKIVVEMTFNPFKEDSERFSGLLNEHMRNDSGGERATEDV 422

Query: 547 XXXXXXXXXXXXXXAEDVEGKRHNNPYALVIFRGEERETKMIKKTRDPCWDEEFHYMLEE 368
                         AE VEGK HNNPYA+++F+GE + TK+IKKTRDPCW+EEF +MLEE
Sbjct: 423 PSSGAGLLLVVIQGAEHVEGKHHNNPYAIILFKGERKNTKLIKKTRDPCWNEEFEFMLEE 482

Query: 367 APVNDKIHIEVLSKRTVFGFQFKESLGHVGINLIDVVNNGRINEKYHLINSKNGVIHVEI 188
           APV +KIHIEV+SKR  FGF FKESLGHV I+LIDVV+NG IN+KY+LI SK+GVIHV +
Sbjct: 483 APVKEKIHIEVMSKRKGFGFSFKESLGHVDIDLIDVVHNGHINKKYNLIRSKHGVIHVGL 542

Query: 187 RWR 179
           RW+
Sbjct: 543 RWK 545


>gb|EEE66239.1| hypothetical protein OsJ_22411 [Oryza sativa Japonica Group]
          Length = 540

 Score =  208 bits (530), Expect = 8e-52
 Identities = 110/188 (58%), Positives = 132/188 (70%), Gaps = 3/188 (1%)
 Frame = -2

Query: 727 FRLDLLKSIDPNKSQSKKKRGQLVVELAFNPFRXXXXXXXXXXXGYTRMENGSGGVS-EX 551
           F LDLLKS+DPN   +KK RG+LVVEL F+PFR               M +G G VS + 
Sbjct: 360 FTLDLLKSMDPNDPHNKKNRGKLVVELTFDPFRDDSNSTIL-------MSDGEGNVSVKR 412

Query: 550 XXXXXXXXXXXXXXXAEDVEGKRHNNPYALVIFRGEERETKMIKKTRDPCWDEEFHYMLE 371
                          AEDVEGKRH NPYA+V FRGE +ETK+IKKTRDP W+EEF +M++
Sbjct: 413 DVPPSGGLLLVSVENAEDVEGKRHTNPYAVVHFRGERKETKIIKKTRDPRWNEEFQFMVD 472

Query: 370 EAPVNDKIHIEVLSKRTVFGFQF--KESLGHVGINLIDVVNNGRINEKYHLINSKNGVIH 197
           EAPV+DKIHIEV+SKR      F  KESLGHV INL+DVVNNGRINEKYHLINS+NG++H
Sbjct: 473 EAPVDDKIHIEVVSKRRGLRLPFRNKESLGHVDINLVDVVNNGRINEKYHLINSRNGMVH 532

Query: 196 VEIRWRTI 173
           VE++W T+
Sbjct: 533 VEMKWSTV 540


>gb|EEC81201.1| hypothetical protein OsI_24227 [Oryza sativa Indica Group]
          Length = 540

 Score =  207 bits (526), Expect = 2e-51
 Identities = 109/188 (57%), Positives = 132/188 (70%), Gaps = 3/188 (1%)
 Frame = -2

Query: 727 FRLDLLKSIDPNKSQSKKKRGQLVVELAFNPFRXXXXXXXXXXXGYTRMENGSGGVS-EX 551
           F LDLLKS+DPN   +KK RG+LVVEL F+PFR               M +G G VS + 
Sbjct: 360 FTLDLLKSMDPNDPHNKKNRGKLVVELTFDPFRDDSNSTIL-------MSDGEGNVSVKR 412

Query: 550 XXXXXXXXXXXXXXXAEDVEGKRHNNPYALVIFRGEERETKMIKKTRDPCWDEEFHYMLE 371
                          A+DVEGKRH NPYA+V FRGE +ETK+IKKTRDP W+EEF +M++
Sbjct: 413 DVPPSGGLLLVSVENAKDVEGKRHTNPYAVVHFRGERKETKIIKKTRDPRWNEEFQFMVD 472

Query: 370 EAPVNDKIHIEVLSKRTVFGFQF--KESLGHVGINLIDVVNNGRINEKYHLINSKNGVIH 197
           EAPV+DKIHIEV+SKR      F  KESLGHV INL+DVVNNGRINEKYHLINS+NG++H
Sbjct: 473 EAPVDDKIHIEVVSKRRGLRLPFRNKESLGHVDINLVDVVNNGRINEKYHLINSRNGMVH 532

Query: 196 VEIRWRTI 173
           VE++W T+
Sbjct: 533 VEMKWSTV 540


>ref|XP_002437472.1| plant synaptotagmin [Sorghum bicolor] gi|241915695|gb|EER88839.1|
           plant synaptotagmin [Sorghum bicolor]
          Length = 536

 Score =  205 bits (521), Expect = 9e-51
 Identities = 107/188 (56%), Positives = 129/188 (68%), Gaps = 3/188 (1%)
 Frame = -2

Query: 727 FRLDLLKSIDPNKSQSKKKRGQLVVELAFNPFRXXXXXXXXXXXGYTRMENG---SGGVS 557
           F LDL++S++PN  Q+KK RG+L+VEL F+PFR              R E     SGGV 
Sbjct: 360 FTLDLVRSMNPNDPQNKKNRGKLIVELTFDPFREDNMSSDGEGNASVRREADGECSGGV- 418

Query: 556 EXXXXXXXXXXXXXXXXAEDVEGKRHNNPYALVIFRGEERETKMIKKTRDPCWDEEFHYM 377
                            AEDVEGKRH NPYA V+FRGE ++TK+I+KTRDP W EEF +M
Sbjct: 419 ----------LLVSVENAEDVEGKRHTNPYAEVLFRGERKKTKVIRKTRDPRWSEEFQFM 468

Query: 376 LEEAPVNDKIHIEVLSKRTVFGFQFKESLGHVGINLIDVVNNGRINEKYHLINSKNGVIH 197
           ++E PV DKIHIEV SKR    F+ KESLGHV INL+DVVNNGRINEKYHLINS+NG+IH
Sbjct: 469 VDEPPVEDKIHIEVKSKRRGLPFRNKESLGHVNINLVDVVNNGRINEKYHLINSRNGMIH 528

Query: 196 VEIRWRTI 173
           VEI+W T+
Sbjct: 529 VEIKWNTV 536


Top