BLASTX nr result

ID: Coptis23_contig00030178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030178
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283543.1| PREDICTED: uncharacterized protein sll0410 [...    69   5e-10
emb|CBI27005.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002283545.2| PREDICTED: uncharacterized protein LOC100250...    62   4e-08
emb|CAN76461.1| hypothetical protein VITISV_010829 [Vitis vinifera]    62   4e-08
ref|XP_003516823.1| PREDICTED: uncharacterized protein LOC100806...    56   3e-06

>ref|XP_002283543.1| PREDICTED: uncharacterized protein sll0410 [Vitis vinifera]
          Length = 208

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 43/95 (45%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
 Frame = +3

Query: 129 MVQSLISRLHVTLPPSLAMSSYNVTY-PTKLLHVSWPSDYSHGKLFLSTRGVQFLPPVRN 305
           M+Q+L+S  H+ +P S A +     Y P  LL    P          S      +P VR+
Sbjct: 1   MLQALLSPTHMAVPASRAHTRGLRLYRPPLLLPAPQPPSNCRSPRLRS------VPAVRS 54

Query: 306 VNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVV 410
            +  AFD +GGKGM GF +VELKVRDYELDQYGVV
Sbjct: 55  ASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVV 89


>emb|CBI27005.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +3

Query: 288 LPPVRNVNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVV 410
           +P VR+ +  AFD +GGKGM GF +VELKVRDYELDQYGVV
Sbjct: 39  VPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVV 79


>ref|XP_002283545.2| PREDICTED: uncharacterized protein LOC100250950 [Vitis vinifera]
           gi|297737802|emb|CBI27003.3| unnamed protein product
           [Vitis vinifera]
          Length = 198

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +3

Query: 288 LPPVRNVNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVV 410
           +P VR+ +  AFD +GGKGM GF +VELKVRDYELDQYGVV
Sbjct: 39  VPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVV 79


>emb|CAN76461.1| hypothetical protein VITISV_010829 [Vitis vinifera]
          Length = 277

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/41 (70%), Positives = 34/41 (82%)
 Frame = +3

Query: 288 LPPVRNVNVKAFDVQGGKGMIGFFEVELKVRDYELDQYGVV 410
           +P VR+ +  AFD +GGKGM GF +VELKVRDYELDQYGVV
Sbjct: 39  VPAVRSASGLAFDFKGGKGMSGFLDVELKVRDYELDQYGVV 79


>ref|XP_003516823.1| PREDICTED: uncharacterized protein LOC100806931 [Glycine max]
          Length = 204

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/30 (83%), Positives = 28/30 (93%)
 Frame = +3

Query: 321 FDVQGGKGMIGFFEVELKVRDYELDQYGVV 410
           FD++GGKGM GF +VELKVRDYELDQYGVV
Sbjct: 57  FDLRGGKGMSGFHDVELKVRDYELDQYGVV 86


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