BLASTX nr result
ID: Coptis23_contig00030160
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00030160
(499 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311654.1| predicted protein [Populus trichocarpa] gi|2... 235 4e-63
emb|CBI26352.3| unnamed protein product [Vitis vinifera] 230 4e-61
ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vi... 230 4e-61
ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine ... 228 9e-60
ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|2... 223 2e-59
>ref|XP_002311654.1| predicted protein [Populus trichocarpa] gi|222851474|gb|EEE89021.1|
predicted protein [Populus trichocarpa]
Length = 652
Score = 235 bits (600), Expect(2) = 4e-63
Identities = 116/151 (76%), Positives = 134/151 (88%)
Frame = -1
Query: 454 KRVKATMLVGQDKLKNIRVSHRIGNPMSYDVLKEAILDIQNSFKKQEEVPFSIAVISDTK 275
+R + + + Q KLKNI+VSHRIGNPM++D L+E ILDIQNSF K E++ FSI VISD +
Sbjct: 429 ERKRTSSVANQRKLKNIQVSHRIGNPMNFDALQETILDIQNSFNKDEDISFSIVVISDRE 488
Query: 274 WLLGDPSRGDKQAAYSLLLAENICNKYGVKVENLVAEIVDTKLGKQITRIKPSLTYIAAE 95
WLLGDPSR DKQ+A+SLLLAENICNK GVKV+NLVAEIVD+KLGKQI+RIKPSLTYIAAE
Sbjct: 489 WLLGDPSRADKQSAFSLLLAENICNKLGVKVQNLVAEIVDSKLGKQISRIKPSLTYIAAE 548
Query: 94 EVMGLITAQVAENCELNKVWKDILNAEGDEI 2
EVM L+TAQVAEN ELN+VWKDILNAEGDEI
Sbjct: 549 EVMSLVTAQVAENSELNEVWKDILNAEGDEI 579
Score = 31.2 bits (69), Expect(2) = 4e-63
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -3
Query: 497 GPGSILEILSDEPLEE 450
GPGS+LEILSD PL+E
Sbjct: 414 GPGSVLEILSDVPLDE 429
>emb|CBI26352.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 230 bits (586), Expect(2) = 4e-61
Identities = 115/150 (76%), Positives = 132/150 (88%)
Frame = -1
Query: 451 RVKATMLVGQDKLKNIRVSHRIGNPMSYDVLKEAILDIQNSFKKQEEVPFSIAVISDTKW 272
R +A+ G K+KNI+VSHR+GNPM+YD L+E IL+I++SFKK E VP SI VISD +
Sbjct: 624 RNRASNFAGHGKVKNIQVSHRVGNPMNYDTLRETILNIRSSFKKGESVPLSIVVISDREC 683
Query: 271 LLGDPSRGDKQAAYSLLLAENICNKYGVKVENLVAEIVDTKLGKQITRIKPSLTYIAAEE 92
LLGDPSR DK +AYSLLLAENICNK GVKV+NLVAEIVD+KLGKQITRI+PSLTYIAAEE
Sbjct: 684 LLGDPSRADKHSAYSLLLAENICNKLGVKVQNLVAEIVDSKLGKQITRIRPSLTYIAAEE 743
Query: 91 VMGLITAQVAENCELNKVWKDILNAEGDEI 2
VMGL+TAQVAEN ELN+VWKDILNAEGDEI
Sbjct: 744 VMGLVTAQVAENSELNEVWKDILNAEGDEI 773
Score = 30.0 bits (66), Expect(2) = 4e-61
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -3
Query: 497 GPGSILEILSDEPLEE 450
GPGS+LEILSD PL++
Sbjct: 608 GPGSVLEILSDVPLDD 623
>ref|XP_002280086.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
Length = 729
Score = 230 bits (586), Expect(2) = 4e-61
Identities = 115/150 (76%), Positives = 132/150 (88%)
Frame = -1
Query: 451 RVKATMLVGQDKLKNIRVSHRIGNPMSYDVLKEAILDIQNSFKKQEEVPFSIAVISDTKW 272
R +A+ G K+KNI+VSHR+GNPM+YD L+E IL+I++SFKK E VP SI VISD +
Sbjct: 507 RNRASNFAGHGKVKNIQVSHRVGNPMNYDTLRETILNIRSSFKKGESVPLSIVVISDREC 566
Query: 271 LLGDPSRGDKQAAYSLLLAENICNKYGVKVENLVAEIVDTKLGKQITRIKPSLTYIAAEE 92
LLGDPSR DK +AYSLLLAENICNK GVKV+NLVAEIVD+KLGKQITRI+PSLTYIAAEE
Sbjct: 567 LLGDPSRADKHSAYSLLLAENICNKLGVKVQNLVAEIVDSKLGKQITRIRPSLTYIAAEE 626
Query: 91 VMGLITAQVAENCELNKVWKDILNAEGDEI 2
VMGL+TAQVAEN ELN+VWKDILNAEGDEI
Sbjct: 627 VMGLVTAQVAENSELNEVWKDILNAEGDEI 656
Score = 30.0 bits (66), Expect(2) = 4e-61
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -3
Query: 497 GPGSILEILSDEPLEE 450
GPGS+LEILSD PL++
Sbjct: 491 GPGSVLEILSDVPLDD 506
>ref|XP_003555523.1| PREDICTED: ion channel CASTOR-like [Glycine max]
Length = 850
Score = 228 bits (582), Expect(2) = 9e-60
Identities = 114/148 (77%), Positives = 131/148 (88%)
Frame = -1
Query: 445 KATMLVGQDKLKNIRVSHRIGNPMSYDVLKEAILDIQNSFKKQEEVPFSIAVISDTKWLL 266
KA+ + G +KLKN+RVSHRIGNPM YD LKE IL+IQNS K E+VP SIAVISD WLL
Sbjct: 631 KASNINGHNKLKNVRVSHRIGNPMDYDTLKETILNIQNSLKN-EDVPMSIAVISDRDWLL 689
Query: 265 GDPSRGDKQAAYSLLLAENICNKYGVKVENLVAEIVDTKLGKQITRIKPSLTYIAAEEVM 86
GDP++ DK +AYSLLLAENICNK GVKV+NLVAEIVD+KLGKQI+RIKPS+TYIAAEE+M
Sbjct: 690 GDPAKADKLSAYSLLLAENICNKLGVKVQNLVAEIVDSKLGKQISRIKPSVTYIAAEEIM 749
Query: 85 GLITAQVAENCELNKVWKDILNAEGDEI 2
L+TAQVAEN ELN+VWKD+LNAEGDEI
Sbjct: 750 SLVTAQVAENSELNEVWKDVLNAEGDEI 777
Score = 26.9 bits (58), Expect(2) = 9e-60
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 497 GPGSILEILSDEPLEE 450
GP S+LE+LSD PL++
Sbjct: 612 GPESVLEVLSDTPLDD 627
>ref|XP_002315738.1| predicted protein [Populus trichocarpa] gi|222864778|gb|EEF01909.1|
predicted protein [Populus trichocarpa]
Length = 751
Score = 223 bits (567), Expect(2) = 2e-59
Identities = 111/161 (68%), Positives = 134/161 (83%), Gaps = 10/161 (6%)
Frame = -1
Query: 454 KRVKATMLVGQDKLKNIRVSHRIGNPMSYDVLKEAILDIQNSFKKQEEVPFSIAVISDTK 275
+R++ + + Q KL+N+RVSHRIGNPM++D L+E ILDIQNS KK E++ FSI VISD +
Sbjct: 518 ERMRTSSIASQRKLENVRVSHRIGNPMNFDALQETILDIQNSLKKDEDISFSIVVISDRE 577
Query: 274 WLLGDPSRGDKQAAYSLLLAENICNKYGVKVENLVAEIVDTKLGK----------QITRI 125
WL+GDPSR DKQ+A+SL+LAENIC K GVKV+NLVAEIVD+KLGK QITRI
Sbjct: 578 WLIGDPSRADKQSAFSLILAENICIKLGVKVQNLVAEIVDSKLGKQVTHPIIRSLQITRI 637
Query: 124 KPSLTYIAAEEVMGLITAQVAENCELNKVWKDILNAEGDEI 2
KP+LTYIAAEEVM L+TAQVAEN E+N+VWKDILNAEGDEI
Sbjct: 638 KPNLTYIAAEEVMSLVTAQVAENSEMNEVWKDILNAEGDEI 678
Score = 31.6 bits (70), Expect(2) = 2e-59
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -3
Query: 497 GPGSILEILSDEPLEE 450
GPGSILEILSD PL+E
Sbjct: 503 GPGSILEILSDVPLDE 518