BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030141
         (478 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat...    59   4e-07
emb|CBI34855.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat...    55   8e-06

>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950 [Vitis vinifera]
          Length = 1291

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
 Frame = -3

Query: 239 KSEKKIGSNMFVGSAFTEFYSKCREMGDDLRVSE----PDVVL*TSMVTGY 99
           K   +IGS+MFVGSA  E YSKC +MG+ L+V E    PD VL TSMVTGY
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180


>emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/51 (60%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
 Frame = -3

Query: 239 KSEKKIGSNMFVGSAFTEFYSKCREMGDDLRVSE----PDVVL*TSMVTGY 99
           K   +IGS+MFVGSA  E YSKC +MG+ L+V E    PD VL TSMVTGY
Sbjct: 130 KKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGY 180


>ref|XP_003525738.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g01580-like [Glycine max]
          Length = 701

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
 Frame = -3

Query: 233 EKKIGSNMFVGSAFTEFYSKCREMGDDLRV----SEPDVVL*TSMVTGY 99
           +KKI S+MFVGSA  E YSKC +M D ++V     +PDVVL TS++TGY
Sbjct: 132 KKKIDSDMFVGSALIELYSKCGQMNDAVKVFTEYPKPDVVLWTSIITGY 180