BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030138
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3...   280   1e-73
gb|ABK24405.1| unknown [Picea sitchensis]                             280   2e-73
ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putativ...   278   3e-73
emb|CAN62124.1| hypothetical protein VITISV_037577 [Vitis vinifera]   277   8e-73
sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation fact...   275   3e-72

>ref|XP_002275011.1| PREDICTED: eukaryotic initiation factor 4A-3-like [Vitis vinifera]
          Length = 412

 Score =  280 bits (716), Expect = 1e-73
 Identities = 141/173 (81%), Positives = 160/173 (92%)
 Frame = +2

Query: 53  ATKEDSIVFETSIGVETITSFDKMGIKDELLRGIYEYGFEKPSAIQQRAVLPIIKGRDVI 232
           A  ++ +VFET+ GVE I SFD+MGIKD+LLRGIY YGFEKPSAIQQRAVLPII+GRDVI
Sbjct: 21  AVDDEKLVFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVI 80

Query: 233 AQAQSGTGKSSMIAVTVCQIVDTSKKEVQALIVSPTRELASQTGKVILAIGGFINIQAHS 412
           AQAQSGTGK+SMIA+TVCQ+VDTS +EVQALI+SPTRELASQT KVILAIG FINIQAH+
Sbjct: 81  AQAQSGTGKTSMIALTVCQMVDTSNREVQALILSPTRELASQTEKVILAIGDFINIQAHA 140

Query: 413 CIGGQSLGEDIRKLEHGVHVVSGTPGRVVDMIKQRALRTREVKLLVLDESDEM 571
           CIGG+S+GEDIRKLE+GVH+VSGTPGRV DMIK+R LRTR +KLLVLDESDEM
Sbjct: 141 CIGGKSVGEDIRKLEYGVHIVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEM 193


>gb|ABK24405.1| unknown [Picea sitchensis]
          Length = 408

 Score =  280 bits (715), Expect = 2e-73
 Identities = 141/186 (75%), Positives = 164/186 (88%)
 Frame = +2

Query: 14  MATVKSRKEKGGEATKEDSIVFETSIGVETITSFDKMGIKDELLRGIYEYGFEKPSAIQQ 193
           MA     +  G     +++++FETS GVE I+SFD+MGI+D+LLRGIY+YGFEKPSAIQQ
Sbjct: 4   MAGGGRNRNNGRNPDGDENLIFETSPGVEVISSFDQMGIRDDLLRGIYQYGFEKPSAIQQ 63

Query: 194 RAVLPIIKGRDVIAQAQSGTGKSSMIAVTVCQIVDTSKKEVQALIVSPTRELASQTGKVI 373
           RAV+PII GRDVIAQAQSGTGK+SMIA+ VCQI+DTS +EVQALIVSPTRELA+QT KVI
Sbjct: 64  RAVMPIINGRDVIAQAQSGTGKTSMIALAVCQIIDTSIREVQALIVSPTRELAAQTEKVI 123

Query: 374 LAIGGFINIQAHSCIGGQSLGEDIRKLEHGVHVVSGTPGRVVDMIKQRALRTREVKLLVL 553
           LAIG FIN+QAH+CIGG+S+GEDIRKLE+GVHVVSGTPGRV DMIK+R LRTR VKLLVL
Sbjct: 124 LAIGDFINVQAHACIGGKSIGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAVKLLVL 183

Query: 554 DESDEM 571
           DESDEM
Sbjct: 184 DESDEM 189


>ref|XP_002520905.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539871|gb|EEF41450.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 407

 Score =  278 bits (712), Expect = 3e-73
 Identities = 138/173 (79%), Positives = 161/173 (93%)
 Frame = +2

Query: 53  ATKEDSIVFETSIGVETITSFDKMGIKDELLRGIYEYGFEKPSAIQQRAVLPIIKGRDVI 232
           A +++ +VFET+ G+E ITSFD+MGIK++LLRGIY YGFEKPSAIQQRAV+PIIKGRDVI
Sbjct: 16  AAEDEKLVFETTEGIEPITSFDEMGIKNDLLRGIYAYGFEKPSAIQQRAVMPIIKGRDVI 75

Query: 233 AQAQSGTGKSSMIAVTVCQIVDTSKKEVQALIVSPTRELASQTGKVILAIGGFINIQAHS 412
           AQAQSGTGK+SMIA+T CQ+VDTS +EVQALI+SPTRELA+QT KVILAIG +INIQAH+
Sbjct: 76  AQAQSGTGKTSMIALTACQLVDTSSREVQALILSPTRELAAQTEKVILAIGDYINIQAHA 135

Query: 413 CIGGQSLGEDIRKLEHGVHVVSGTPGRVVDMIKQRALRTREVKLLVLDESDEM 571
           CIGG+S+GEDIRKLE+GVHVVSGTPGRV DMIK+R LRTR +KLLVLDESDEM
Sbjct: 136 CIGGKSVGEDIRKLEYGVHVVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEM 188


>emb|CAN62124.1| hypothetical protein VITISV_037577 [Vitis vinifera]
          Length = 398

 Score =  277 bits (709), Expect = 8e-73
 Identities = 140/167 (83%), Positives = 157/167 (94%)
 Frame = +2

Query: 71  IVFETSIGVETITSFDKMGIKDELLRGIYEYGFEKPSAIQQRAVLPIIKGRDVIAQAQSG 250
           +VFET+ GVE I SFD+MGIKD+LLRGIY YGFEKPSAIQQRAVLPII+GRDVIAQAQSG
Sbjct: 10  LVFETTEGVEPIMSFDQMGIKDDLLRGIYAYGFEKPSAIQQRAVLPIIQGRDVIAQAQSG 69

Query: 251 TGKSSMIAVTVCQIVDTSKKEVQALIVSPTRELASQTGKVILAIGGFINIQAHSCIGGQS 430
           TGK+SMIA+TVCQ+VDTS +EVQALI+SPTRELASQT KVILAIG FINIQAH+CIGG+S
Sbjct: 70  TGKTSMIALTVCQMVDTSNREVQALILSPTRELASQTEKVILAIGDFINIQAHACIGGKS 129

Query: 431 LGEDIRKLEHGVHVVSGTPGRVVDMIKQRALRTREVKLLVLDESDEM 571
           +GEDIRKLE+GVH+VSGTPGRV DMIK+R LRTR +KLLVLDESDEM
Sbjct: 130 VGEDIRKLEYGVHIVSGTPGRVCDMIKRRTLRTRAIKLLVLDESDEM 176


>sp|P41380.1|IF4A3_NICPL RecName: Full=Eukaryotic initiation factor 4A-3; Short=eIF-4A-3;
           AltName: Full=ATP-dependent RNA helicase eIF4A-3
           gi|19699|emb|CAA43514.1| nicotiana eukaryotic
           translation initiation factor 4A [Nicotiana
           plumbaginifolia]
          Length = 391

 Score =  275 bits (704), Expect = 3e-72
 Identities = 138/171 (80%), Positives = 156/171 (91%)
 Frame = +2

Query: 59  KEDSIVFETSIGVETITSFDKMGIKDELLRGIYEYGFEKPSAIQQRAVLPIIKGRDVIAQ 238
           +ED +VFETS GVE I SF +MGIKD+LLRG+Y+YGFEKPSAIQQRAVLPII GRDVIAQ
Sbjct: 2   EEDRLVFETSKGVEPIASFAEMGIKDDLLRGVYQYGFEKPSAIQQRAVLPIISGRDVIAQ 61

Query: 239 AQSGTGKSSMIAVTVCQIVDTSKKEVQALIVSPTRELASQTGKVILAIGGFINIQAHSCI 418
           AQSGTGK+SMIA+TVCQIVDT   EVQALI+SPTRELA+QT KVILAIG +IN+QAH+CI
Sbjct: 62  AQSGTGKTSMIALTVCQIVDTKSSEVQALILSPTRELAAQTEKVILAIGDYINVQAHACI 121

Query: 419 GGQSLGEDIRKLEHGVHVVSGTPGRVVDMIKQRALRTREVKLLVLDESDEM 571
           GG+S+GEDIRKLEHGV VVSGTPGRV DMIK+R LRTR +KLL+LDESDEM
Sbjct: 122 GGKSVGEDIRKLEHGVQVVSGTPGRVCDMIKRRTLRTRGIKLLILDESDEM 172