BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030130
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   142   2e-32
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002527905.1| pentatricopeptide repeat-containing protein,...   141   6e-32
ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   141   6e-32
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   140   1e-31

>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/135 (50%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = +2

Query: 20  WAFYSNMAAIYVAAGYHEKAELTLKEIKISK-LNDPKAFHFLLSIYASMGKVEEVNRVWQ 196
           W  YSN+AA+YV A   EKAEL LK+++     +D  A+HFL+S+YA +  + EVNRVW 
Sbjct: 250 WTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWN 309

Query: 197 SLKSAFPKTSNLSYLTMLQTLSRLEYMDGLKRCFDEWELHCSSYDIRLANVLIKAYLKHN 376
           SLKSAFPKT+N+SY  MLQ L+ L  +DGLK CF+EW+  C S+D+RLANV ++A+L  +
Sbjct: 310 SLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWD 369

Query: 377 MTEEANLLLSHLLEK 421
           M ++A  +L   +++
Sbjct: 370 MIKDAESILYEAVKR 384


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/135 (50%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = +2

Query: 20  WAFYSNMAAIYVAAGYHEKAELTLKEIKISK-LNDPKAFHFLLSIYASMGKVEEVNRVWQ 196
           W  YSN+AA+YV A   EKAEL LK+++     +D  A+HFL+S+YA +  + EVNRVW 
Sbjct: 289 WTTYSNLAAVYVNARLFEKAELALKKLEEEMGFHDRLAYHFLISLYAGINNLSEVNRVWN 348

Query: 197 SLKSAFPKTSNLSYLTMLQTLSRLEYMDGLKRCFDEWELHCSSYDIRLANVLIKAYLKHN 376
           SLKSAFPKT+N+SY  MLQ L+ L  +DGLK CF+EW+  C S+D+RLANV ++A+L  +
Sbjct: 349 SLKSAFPKTNNMSYFIMLQALANLNDVDGLKICFEEWKSSCFSFDVRLANVAVRAFLGWD 408

Query: 377 MTEEANLLLSHLLEK 421
           M ++A  +L   +++
Sbjct: 409 MIKDAESILYEAVKR 423


>ref|XP_002527905.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532680|gb|EEF34462.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 490

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/132 (51%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
 Frame = +2

Query: 8   ITPDWAFYSNMAAIYVAAGYHEKAELTLKEIKISKLN-DPKAFHFLLSIYASMGKVEEVN 184
           +  DW  YSN+A+IYV A   EKAE TLKE++   ++ D  AF FL+++Y  +G + E+ 
Sbjct: 225 VAADWTTYSNLASIYVDAQLFEKAEKTLKELEKRNVHRDHSAFQFLITLYGRIGNLHELY 284

Query: 185 RVWQSLKSAFPKTSNLSYLTMLQTLSRLEYMDGLKRCFDEWELHCSSYDIRLANVLIKAY 364
           R+W+SL+ AFPKTSN+SYL M+Q L  L+ + G ++CF EWE +CS YDIR+ANVLIKAY
Sbjct: 285 RIWRSLRLAFPKTSNISYLNMIQVLVNLKDLPGAEKCFREWESNCSGYDIRVANVLIKAY 344

Query: 365 LKHNMTEEANLL 400
            K  + E+A  L
Sbjct: 345 AKKGLLEKAEEL 356


>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  141 bits (355), Expect = 6e-32
 Identities = 69/135 (51%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
 Frame = +2

Query: 20  WAFYSNMAAIYVAAGYHEKAELTLKEIKISKLNDPK-AFHFLLSIYASMGKVEEVNRVWQ 196
           W  Y+N+A IYV AG+ +KAE  LK+++     D + A+HFL+++YA    + EVNRVW 
Sbjct: 216 WTTYTNLATIYVKAGHFDKAESALKKVEEQIERDYREAYHFLITLYAGTSNLGEVNRVWN 275

Query: 197 SLKSAFPKTSNLSYLTMLQTLSRLEYMDGLKRCFDEWELHCSSYDIRLANVLIKAYLKHN 376
           SLKS F  T+N+SYLTML TL++L+ ++GL +CF EWE  C SYD+RLANV I+A L+H+
Sbjct: 276 SLKSNFHTTTNVSYLTMLHTLAKLKDVEGLLKCFKEWESSCHSYDMRLANVAIRACLEHD 335

Query: 377 MTEEANLLLSHLLEK 421
           M EEA L+    L++
Sbjct: 336 MYEEAALIFDDALKR 350


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  140 bits (352), Expect = 1e-31
 Identities = 67/135 (49%), Positives = 96/135 (71%), Gaps = 1/135 (0%)
 Frame = +2

Query: 20  WAFYSNMAAIYVAAGYHEKAELTLKEIK-ISKLNDPKAFHFLLSIYASMGKVEEVNRVWQ 196
           W  YSN+A IY+ AG  EKAE  LK+++ I    + +A+HFL+SIYA  G   EVNRVW 
Sbjct: 246 WTTYSNLATIYLKAGIFEKAESALKKLEAIMGFRNREAYHFLISIYAGTGNSNEVNRVWG 305

Query: 197 SLKSAFPKTSNLSYLTMLQTLSRLEYMDGLKRCFDEWELHCSSYDIRLANVLIKAYLKHN 376
            LKS+F   +NLSYL MLQ L++L+ ++G+ +CF EWE  C++YD+R+ANV I+ +L+H+
Sbjct: 306 LLKSSFNMINNLSYLVMLQALAKLKDVEGVAKCFREWESGCTNYDMRIANVAIRVFLQHD 365

Query: 377 MTEEANLLLSHLLEK 421
           M EEA L+    L++
Sbjct: 366 MYEEAELIFDDALKR 380