BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030129
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002326593.1| cytochrome P450 [Populus trichocarpa] gi|222...    61   9e-08
ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncat...    60   2e-07
ref|XP_002525780.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07
ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cuc...    58   1e-06

>ref|XP_002328907.1| predicted protein [Populus trichocarpa] gi|222839337|gb|EEE77674.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 3/157 (1%)
 Frame = -2

Query: 539 LGCCNGFICLSGINLLNTLLPCNP-IYVFNPITEEYAKLSHCDDPNLTELKPGKDRDVCL 363
           LG CNG +C         L+  NP IY++NP T E  +L+           PG   D   
Sbjct: 105 LGSCNGLVC--------GLIHDNPLIYIWNPSTRESRELAI----------PGSSEDDAF 146

Query: 362 SGFGIADSSMVFKLVLVMFSDCEDNF--GKFENRVQVHTLGSTIWRKKNGVVPDVLRQAP 189
            GFG       +K+V V  S   ++      E +V+V TL S IWR    +   VL + P
Sbjct: 147 YGFGYDVKLDDYKIVRVSISTSTNSTDGSNSETKVEVFTLKSNIWRTIQDLRCSVLLEGP 206

Query: 188 EKVSVFAHGCLHWMTVDQSLPNGEPIIVSFNLGVEEF 78
                 A+G LHW+   ++  + + ++VSF+L  E+F
Sbjct: 207 ---GTLANGALHWLVRQENGGSKKCVMVSFDLSEEKF 240


>ref|XP_002326593.1| cytochrome P450 [Populus trichocarpa] gi|222833915|gb|EEE72392.1|
           cytochrome P450 [Populus trichocarpa]
          Length = 617

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
 Frame = -2

Query: 530 CNGFICLSGINLLNTLLPCNPIYVFNPITEEYAKLSHCDDPNLTELKPGKDRDVCLSGFG 351
           CNG + L      N       +Y+ NP+T EY     C  P     + G+D +  LSG G
Sbjct: 119 CNGLLYLREYRSRNPYFDDLVMYILNPVTGEYM----CVPP----AEVGRDLETGLSGLG 170

Query: 350 IADSSMVFKLVLVMFSDCEDNFGKFENRVQVHTLGSTIWRKKNGVVPDVLRQAP----EK 183
            +  +  FK + +   D +++      +  V+TLG+  W K  G  PD+L          
Sbjct: 171 FSPQTNEFKAIRIYKLDVKNDL-----QADVYTLGNGSW-KTVGTAPDILESCLFYHWGY 224

Query: 182 VSVFAHGCLHWMTVDQSLPNGEPIIVSFNLGVEEFGFVPTP 60
           +  F +G  HW+ VD  + +    I++F+   E+FG +  P
Sbjct: 225 MKAFVNGAFHWLLVD--MDDDLDQIITFDFETEQFGSIALP 263


>ref|XP_003598507.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487555|gb|AES68758.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 382

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
 Frame = -2

Query: 539 LGCCNGFICLSGINLLNTLLPCNPIYVFNPITEEYAKLSHCDDPNLTELKPGKDRDVCLS 360
           +G CNG +CL+  N   +L+ C     +NP T ++ +L   +       KP    +V   
Sbjct: 122 IGSCNGIVCLAD-NEYTSLVIC-----WNPSTRKFKELPLFE-------KPTTGLNVMTF 168

Query: 359 GFGIADSSMVFKLVLVMFSDCEDNFGKFENRVQV--HTLGSTIWRKKN----GVVPDVLR 198
           GFG   S   +K+V+V+     D    F N+ QV  HTLG+ IWR       G +P    
Sbjct: 169 GFGYDSSKDNYKVVVVLDYQFLDEDYSFVNKTQVMVHTLGTNIWRTIQEYPFGGLP---- 224

Query: 197 QAPEKVSVFAHGCLHWMTVDQSLPNGEPIIVSFNLGVEEFGFVPTP 60
             P K   F  G ++W+  ++SL      IVSF+L  E +  +  P
Sbjct: 225 -VPVKKGEFVSGTINWLFSEESL-ECPCFIVSFDLAKESYQKISPP 268


>ref|XP_002525780.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534930|gb|EEF36616.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 351

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 3/165 (1%)
 Frame = -2

Query: 536 GCCNGFICLSGINLLNTLLPCN--PIYVFNPITEEYAKLSHCDDPNLTELKPGKDRDVCL 363
           G CNG ICL     LN    CN   +Y++NP T ++  L    D ++             
Sbjct: 97  GSCNGLICLDIHERLNFYGLCNRRDLYLWNPTTNDFKALPTTSDISIMFNN--------- 147

Query: 362 SGFGIADSSMVFKLVLVMFSDCEDNFGKFENRVQVHTLGSTIWRKKNGVVPDV-LRQAPE 186
            GFG  +S   +K+V++  S CE    ++   + + TL +  WR+K   + DV   +   
Sbjct: 148 VGFGYDNSIDDYKVVVIDRSTCELKRTRY---IMIFTLKTNSWRRKE--IQDVKCSRIQS 202

Query: 185 KVSVFAHGCLHWMTVDQSLPNGEPIIVSFNLGVEEFGFVPTPGSH 51
              +  +G LHW     S  +G+ I+++FNL +EE   +P P ++
Sbjct: 203 GKGILCNGALHW--TSHSETHGD-IVLAFNLAMEEIAELPQPDTN 244


>ref|XP_004140601.1| PREDICTED: F-box protein At3g07870-like [Cucumis sativus]
           gi|449519392|ref|XP_004166719.1| PREDICTED: F-box
           protein At3g07870-like [Cucumis sativus]
          Length = 375

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 47/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%)
 Frame = -2

Query: 539 LGCCNGFICLSGINLLNTLLPCNPIYVFNPITEEYAKLSHCDDPNLTELKPGKDRDVCLS 360
           +G CNGF+CLS  +L N       ++++NP T +Y +L    D +  ++         + 
Sbjct: 95  VGSCNGFLCLSD-SLYN-----ENLFIYNPFTRDYLELPKSKDFSNPDV---------VY 139

Query: 359 GFGIADSSMVFKLVLVMFSDCEDNFGKFENR-----VQVHTLGSTIWRKKNGVVPDVLR- 198
           G G    +   K++ +++S     F + + R     VQV TLG++ WR    +   + + 
Sbjct: 140 GIGFHPQTKRLKILKIVYS---KGFRRIQRRFHHSEVQVFTLGTSNWRSIGRIFHHLAQG 196

Query: 197 QAPEKVSVFAHGCLHWMTVDQSLPNGEPIIVSFNLGVEEFGFVPTP 60
           Q+P  +    +G LHW+++ +    G   IVSF+L  EEF  +P P
Sbjct: 197 QSPAAI----NGRLHWVSLPRRHYVGR-TIVSFDLASEEFIDIPKP 237