BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030116
         (839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
ref|XP_002525134.1| pentatricopeptide repeat-containing protein,...   143   5e-32
ref|NP_191418.2| pentatricopeptide repeat-containing protein [Ar...   138   1e-30
emb|CAB68197.1| putative protein [Arabidopsis thaliana]               138   1e-30
ref|XP_002876469.1| pentatricopeptide repeat-containing protein ...   136   7e-30

>ref|XP_002326026.1| predicted protein [Populus trichocarpa] gi|222862901|gb|EEF00408.1|
           predicted protein [Populus trichocarpa]
          Length = 737

 Score =  145 bits (365), Expect = 1e-32
 Identities = 69/117 (58%), Positives = 89/117 (76%)
 Frame = -1

Query: 839 LISALGLHGFPCVALERFREMESVGIKPDRVAFIAVLSVCRHXXXXXXXXXLFGRMKGYN 660
           LISALG++G    ALERF +ME +G +PD+VAFIAVL+ CRH         LFG+M  Y+
Sbjct: 617 LISALGINGCAQEALERFNDMEFLGSRPDKVAFIAVLTACRHGALVREGMQLFGKMNNYH 676

Query: 659 VEPEMDHYICVVDLLARNGHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSDVEEAA 489
           +EP+MDHY C+VDLLARNGHL+EAEK+IS MPF P+  IWR+FLEGC++  + E+ A
Sbjct: 677 IEPDMDHYHCLVDLLARNGHLEEAEKVISCMPFPPDAQIWRSFLEGCKKRRNTEDHA 733


>ref|XP_002525134.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535593|gb|EEF37261.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 792

 Score =  143 bits (360), Expect = 5e-32
 Identities = 67/115 (58%), Positives = 86/115 (74%)
 Frame = -1

Query: 839 LISALGLHGFPCVALERFREMESVGIKPDRVAFIAVLSVCRHXXXXXXXXXLFGRMKGYN 660
           LISALG++     ALERF++ME  G++PD+VAFIAVL+ CRH         LF +MK Y 
Sbjct: 618 LISALGINSCAHEALERFKDMEHQGLRPDKVAFIAVLTACRHGALVGEGIELFKKMKSYG 677

Query: 659 VEPEMDHYICVVDLLARNGHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSDVEE 495
           +EPEMDHY C+VDL +R+GH+KEAEK+IS MP  PN +IWRTFLEGC++Y   E+
Sbjct: 678 LEPEMDHYHCLVDLFSRHGHVKEAEKVISSMPCPPNALIWRTFLEGCKKYRSKED 732


>ref|NP_191418.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218525906|sp|Q0WN01.2|PP286_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g58590 gi|332646281|gb|AEE79802.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  138 bits (348), Expect = 1e-30
 Identities = 65/112 (58%), Positives = 82/112 (73%)
 Frame = -1

Query: 839 LISALGLHGFPCVALERFREMESVGIKPDRVAFIAVLSVCRHXXXXXXXXXLFGRMKGYN 660
           LIS LG+HG+   ALE+F+E  S+G KPDRV+FI++L+ CRH         LF +MK Y 
Sbjct: 618 LISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYG 677

Query: 659 VEPEMDHYICVVDLLARNGHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSD 504
           VEPEMDHY C VDLLARNG+LKEAE LI  MPF  +  +WRTFL+GC R+++
Sbjct: 678 VEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 729


>emb|CAB68197.1| putative protein [Arabidopsis thaliana]
          Length = 810

 Score =  138 bits (348), Expect = 1e-30
 Identities = 65/112 (58%), Positives = 82/112 (73%)
 Frame = -1

Query: 839  LISALGLHGFPCVALERFREMESVGIKPDRVAFIAVLSVCRHXXXXXXXXXLFGRMKGYN 660
            LIS LG+HG+   ALE+F+E  S+G KPDRV+FI++L+ CRH         LF +MK Y 
Sbjct: 687  LISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKMKDYG 746

Query: 659  VEPEMDHYICVVDLLARNGHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSD 504
            VEPEMDHY C VDLLARNG+LKEAE LI  MPF  +  +WRTFL+GC R+++
Sbjct: 747  VEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGCNRFAE 798


>ref|XP_002876469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322307|gb|EFH52728.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  136 bits (342), Expect = 7e-30
 Identities = 63/112 (56%), Positives = 83/112 (74%)
 Frame = -1

Query: 839 LISALGLHGFPCVALERFREMESVGIKPDRVAFIAVLSVCRHXXXXXXXXXLFGRMKGYN 660
           LIS+LG++G+   ALE+F+E  S+G KPDRV+FI++L+ CRH         LF +MK Y 
Sbjct: 618 LISSLGIYGYGHEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMDLFQKMKDYG 677

Query: 659 VEPEMDHYICVVDLLARNGHLKEAEKLISGMPFQPNVVIWRTFLEGCRRYSD 504
           +EPEMDHY C VDLLARNG+LKEAE LI  MPF  +  +WRTFL+GC R+++
Sbjct: 678 IEPEMDHYRCAVDLLARNGYLKEAEHLIHRMPFPADAPVWRTFLDGCNRFAE 729