BLASTX nr result

ID: Coptis23_contig00030114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030114
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|2...    63   4e-08
ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07
ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arab...    57   2e-06
ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago ...    57   3e-06

>ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|222871406|gb|EEF08537.1|
           predicted protein [Populus trichocarpa]
          Length = 134

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 6/99 (6%)
 Frame = +2

Query: 119 WGSMNFGDSNSYSQSGRLQQVTLWGDCYIEKRRVFLSSYQFCRKTSLADRIKTSFIDVTK 298
           W  +  G SNS         V +     +EKR++FL SYQFCRK +L +RIK S I   K
Sbjct: 31  WNELLGGYSNSSEHYSSSSSVVM-----MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKK 85

Query: 299 RFIIWFRLRSPRKV------SVKVRYRCFGRRKFHRLVS 397
             ++W RLRS RK+       ++  + C  RR+F RL++
Sbjct: 86  --VMWLRLRSARKIRRLVWSRLRYAFYCRRRRRFLRLIN 122


>ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|222838651|gb|EEE77016.1|
           predicted protein [Populus trichocarpa]
          Length = 81

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 6/71 (8%)
 Frame = +2

Query: 203 IEKRRVFLSSYQFCRKTSLADRIKTSFIDVTKRFIIWFRLRSPRKV------SVKVRYRC 364
           +EKR++FL SYQFCRK +L +RIK S I   K  ++W RLRS RK+       ++  + C
Sbjct: 1   MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKK--VMWLRLRSARKIRRLVWSRLRYAFYC 58

Query: 365 FGRRKFHRLVS 397
             RR+F RL++
Sbjct: 59  RRRRRFLRLIN 69


>ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp.
           lyrata] gi|297330384|gb|EFH60803.1| hypothetical protein
           ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata]
          Length = 101

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
 Frame = +2

Query: 143 SNSYSQSGRLQQVTLWGDCYIEKRRVFLSSYQFCRKTSLADRIKTSFIDVTKRFIIWFRL 322
           SN   QS        +G  Y+EKR++FL SYQF RK SL ++IK S   V K+ ++W RL
Sbjct: 3   SNGVWQSNNGYYSYGYGGGYVEKRQLFLKSYQFSRKQSLTEKIKISVKRVAKK-VVWMRL 61

Query: 323 RSPRKVSVKVRYR-----CFGRRKFHRLV 394
           +S R++   V  R      + RR+F RL+
Sbjct: 62  KSARRLKRVVWSRFKTAFFYRRRRFFRLL 90


>ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago truncatula]
           gi|355480329|gb|AES61532.1| hypothetical protein
           MTR_1g085240 [Medicago truncatula]
          Length = 114

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%)
 Frame = +2

Query: 203 IEKRRVFLSSYQFCRKTSLADRIKTSFIDVTKRFIIWFRLRSPRKVSVKV----RYRC-- 364
           IEKR++FL SYQFCRK SL +RIK S +   K  ++W +LR  R +  K+    R++C  
Sbjct: 28  IEKRQLFLRSYQFCRKKSLTERIKGSLVRAKK--VVWLKLRYARGLRRKLVFFPRFKCGF 85

Query: 365 -FGRRKFHRLVSS 400
            + RR+F +L+++
Sbjct: 86  YYRRRRFSQLLNN 98


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