BLASTX nr result
ID: Coptis23_contig00030114
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030114 (571 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|2... 63 4e-08 ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|2... 60 3e-07 ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arab... 57 2e-06 ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago ... 57 3e-06 >ref|XP_002329981.1| predicted protein [Populus trichocarpa] gi|222871406|gb|EEF08537.1| predicted protein [Populus trichocarpa] Length = 134 Score = 62.8 bits (151), Expect = 4e-08 Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 6/99 (6%) Frame = +2 Query: 119 WGSMNFGDSNSYSQSGRLQQVTLWGDCYIEKRRVFLSSYQFCRKTSLADRIKTSFIDVTK 298 W + G SNS V + +EKR++FL SYQFCRK +L +RIK S I K Sbjct: 31 WNELLGGYSNSSEHYSSSSSVVM-----MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKK 85 Query: 299 RFIIWFRLRSPRKV------SVKVRYRCFGRRKFHRLVS 397 ++W RLRS RK+ ++ + C RR+F RL++ Sbjct: 86 --VMWLRLRSARKIRRLVWSRLRYAFYCRRRRRFLRLIN 122 >ref|XP_002337264.1| predicted protein [Populus trichocarpa] gi|222838651|gb|EEE77016.1| predicted protein [Populus trichocarpa] Length = 81 Score = 60.1 bits (144), Expect = 3e-07 Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 6/71 (8%) Frame = +2 Query: 203 IEKRRVFLSSYQFCRKTSLADRIKTSFIDVTKRFIIWFRLRSPRKV------SVKVRYRC 364 +EKR++FL SYQFCRK +L +RIK S I K ++W RLRS RK+ ++ + C Sbjct: 1 MEKRQLFLRSYQFCRKRTLTERIKGSLIRAKK--VMWLRLRSARKIRRLVWSRLRYAFYC 58 Query: 365 FGRRKFHRLVS 397 RR+F RL++ Sbjct: 59 RRRRRFLRLIN 69 >ref|XP_002884544.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata] gi|297330384|gb|EFH60803.1| hypothetical protein ARALYDRAFT_896695 [Arabidopsis lyrata subsp. lyrata] Length = 101 Score = 57.4 bits (137), Expect = 2e-06 Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 5/89 (5%) Frame = +2 Query: 143 SNSYSQSGRLQQVTLWGDCYIEKRRVFLSSYQFCRKTSLADRIKTSFIDVTKRFIIWFRL 322 SN QS +G Y+EKR++FL SYQF RK SL ++IK S V K+ ++W RL Sbjct: 3 SNGVWQSNNGYYSYGYGGGYVEKRQLFLKSYQFSRKQSLTEKIKISVKRVAKK-VVWMRL 61 Query: 323 RSPRKVSVKVRYR-----CFGRRKFHRLV 394 +S R++ V R + RR+F RL+ Sbjct: 62 KSARRLKRVVWSRFKTAFFYRRRRFFRLL 90 >ref|XP_003591281.1| hypothetical protein MTR_1g085240 [Medicago truncatula] gi|355480329|gb|AES61532.1| hypothetical protein MTR_1g085240 [Medicago truncatula] Length = 114 Score = 56.6 bits (135), Expect = 3e-06 Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 7/73 (9%) Frame = +2 Query: 203 IEKRRVFLSSYQFCRKTSLADRIKTSFIDVTKRFIIWFRLRSPRKVSVKV----RYRC-- 364 IEKR++FL SYQFCRK SL +RIK S + K ++W +LR R + K+ R++C Sbjct: 28 IEKRQLFLRSYQFCRKKSLTERIKGSLVRAKK--VVWLKLRYARGLRRKLVFFPRFKCGF 85 Query: 365 -FGRRKFHRLVSS 400 + RR+F +L+++ Sbjct: 86 YYRRRRFSQLLNN 98