BLASTX nr result
ID: Coptis23_contig00030106
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00030106 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631968.1| PREDICTED: pre-rRNA-processing protein TSR2 ... 64 1e-08 ref|XP_002315767.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817... 59 4e-07 gb|ACU24536.1| unknown [Glycine max] 59 5e-07 >ref|XP_003631968.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Vitis vinifera] gi|297737064|emb|CBI26265.3| unnamed protein product [Vitis vinifera] Length = 112 Score = 63.9 bits (154), Expect = 1e-08 Identities = 29/45 (64%), Positives = 37/45 (82%) Frame = -3 Query: 175 ELAADILSWFSQPKVALSIDDLEHLLDEHMMLSFNTDTEDGSIEE 41 +LAADI SWFS+ K L ++DLE+LL E M+LSFNT+ EDGSIE+ Sbjct: 51 QLAADIFSWFSESKAPLCVEDLENLLHESMLLSFNTEIEDGSIEQ 95 >ref|XP_002315767.1| predicted protein [Populus trichocarpa] gi|222864807|gb|EEF01938.1| predicted protein [Populus trichocarpa] Length = 126 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/56 (53%), Positives = 38/56 (67%) Frame = -3 Query: 175 ELAADILSWFSQPKVALSIDDLEHLLDEHMMLSFNTDTEDGSIEEGQNKGFLYKEE 8 +L DI SWFSQ K L +DLE+LL E ++LSFNT+ EDGSIEE + + EE Sbjct: 59 QLVLDIFSWFSQSKGTLYAEDLENLLHESLLLSFNTEIEDGSIEEVAEQLMIMHEE 114 >ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1| predicted protein [Populus trichocarpa] Length = 213 Score = 59.3 bits (142), Expect = 3e-07 Identities = 34/59 (57%), Positives = 40/59 (67%) Frame = -3 Query: 184 LIGELAADILSWFSQPKVALSIDDLEHLLDEHMMLSFNTDTEDGSIEEGQNKGFLYKEE 8 L +LA+DILSWF+Q K L IDDLE +LDE MLS NT +DGSIEE K + EE Sbjct: 60 LAEQLASDILSWFTQSKEPLFIDDLEGILDE-AMLSLNTMIDDGSIEEVAEKLMIMHEE 117 >ref|XP_003552086.1| PREDICTED: uncharacterized protein LOC100817824 [Glycine max] Length = 203 Score = 58.9 bits (141), Expect = 4e-07 Identities = 32/56 (57%), Positives = 39/56 (69%) Frame = -3 Query: 175 ELAADILSWFSQPKVALSIDDLEHLLDEHMMLSFNTDTEDGSIEEGQNKGFLYKEE 8 +LA+DILSWF+Q K L IDDLE +LD+ MLS N + EDGSIEE K + EE Sbjct: 48 QLASDILSWFTQSKEPLYIDDLEDILDQG-MLSLNVEVEDGSIEEVAEKLMVMHEE 102 >gb|ACU24536.1| unknown [Glycine max] Length = 203 Score = 58.5 bits (140), Expect = 5e-07 Identities = 32/56 (57%), Positives = 39/56 (69%) Frame = -3 Query: 175 ELAADILSWFSQPKVALSIDDLEHLLDEHMMLSFNTDTEDGSIEEGQNKGFLYKEE 8 +LA+DILSWF+Q K L IDDLE +LD+ MLS N + EDGSIEE K + EE Sbjct: 48 QLASDILSWFTQSKEPLYIDDLEDILDQG-MLSLNVEVEDGSIEEVAEKLMVMYEE 102