BLASTX nr result

ID: Coptis23_contig00030101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030101
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632681.1| PREDICTED: uncharacterized protein LOC100257...   103   2e-20
emb|CBI29995.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_002309293.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18
ref|NP_191364.1| uncharacterized protein [Arabidopsis thaliana] ...    94   9e-18

>ref|XP_003632681.1| PREDICTED: uncharacterized protein LOC100257222 [Vitis vinifera]
          Length = 1284

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   CSRCNGLLLEGFSQIVMYGKSQQLEG--GHVGNGRMPSVSSESDVGVTTKISVCEDDSQD 175
           CSRCNGLLLEGF QIVMYGKS Q EG  G + N R  ++  ++D GV +  + C+D++QD
Sbjct: 77  CSRCNGLLLEGFLQIVMYGKSLQQEGAGGQLPNHRSGALKIQND-GVLSTTNGCQDEAQD 135

Query: 176 PSVHPWGGLIATREGILTLLDCFLEAKS 259
           PSVHPWGGL  TR+G LTLLD FL + S
Sbjct: 136 PSVHPWGGLTTTRDGALTLLDSFLFSHS 163


>emb|CBI29995.3| unnamed protein product [Vitis vinifera]
          Length = 1196

 Score =  103 bits (256), Expect = 2e-20
 Identities = 53/88 (60%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   CSRCNGLLLEGFSQIVMYGKSQQLEG--GHVGNGRMPSVSSESDVGVTTKISVCEDDSQD 175
           CSRCNGLLLEGF QIVMYGKS Q EG  G + N R  ++  ++D GV +  + C+D++QD
Sbjct: 77  CSRCNGLLLEGFLQIVMYGKSLQQEGAGGQLPNHRSGALKIQND-GVLSTTNGCQDEAQD 135

Query: 176 PSVHPWGGLIATREGILTLLDCFLEAKS 259
           PSVHPWGGL  TR+G LTLLD FL + S
Sbjct: 136 PSVHPWGGLTTTRDGALTLLDSFLFSHS 163


>ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|222867368|gb|EEF04499.1|
           predicted protein [Populus trichocarpa]
          Length = 1180

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/88 (57%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   CSRCNGLLLEGFSQIVMYGKSQQLEGG--HVGNGRMPSVSSESDVGVTTKISVCEDDSQD 175
           CSRCNGLLLEGF QIVMY KS Q EGG  H+   R+ +  + +D G     + C+D+ QD
Sbjct: 74  CSRCNGLLLEGFMQIVMYVKSLQQEGGGGHIPCNRLEASKNLNDCGSHVP-NGCQDEIQD 132

Query: 176 PSVHPWGGLIATREGILTLLDCFLEAKS 259
           PSVHPWGGL  TR+G LTLL C+L +KS
Sbjct: 133 PSVHPWGGLTTTRDGSLTLLTCYLFSKS 160


>ref|XP_002309293.1| predicted protein [Populus trichocarpa] gi|222855269|gb|EEE92816.1|
           predicted protein [Populus trichocarpa]
          Length = 1222

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/88 (56%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
 Frame = +2

Query: 2   CSRCNGLLLEGFSQIVMYGKSQQLEGG--HVGNGRMPSVSSESDVGVTTKISVCEDDSQD 175
           CSRCNGLLLEGF QIVMYGKS Q EGG  H+    + +  + +D G +   + C+D+ QD
Sbjct: 74  CSRCNGLLLEGFMQIVMYGKSLQQEGGAGHLRCDILEASKNLNDCG-SHVTNGCQDEIQD 132

Query: 176 PSVHPWGGLIATREGILTLLDCFLEAKS 259
           PSV+PWGGL  TR+G LTLL C+L +KS
Sbjct: 133 PSVYPWGGLTTTRDGSLTLLKCYLFSKS 160


>ref|NP_191364.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6729548|emb|CAB67633.1| putative protein [Arabidopsis
           thaliana] gi|332646215|gb|AEE79736.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 1209

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 50/87 (57%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +2

Query: 2   CSRCNGLLLEGFSQIVMYGKSQQLEGGHVGNGRMPSVSSESDVGVTTKISV-CEDDSQDP 178
           CSRCNGLLLEGF QIVM+GKS   EG    +    S  S+        +S  C D+ QDP
Sbjct: 62  CSRCNGLLLEGFLQIVMHGKSLHPEGSLGNSPCNKSGGSKYQYDCNAVVSNGCADEMQDP 121

Query: 179 SVHPWGGLIATREGILTLLDCFLEAKS 259
           SVHPWGGL  TR+G LTLLDC+L AKS
Sbjct: 122 SVHPWGGLTTTRDGSLTLLDCYLYAKS 148


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