BLASTX nr result

ID: Coptis23_contig00030086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030086
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containi...    63   2e-08
emb|CBI35592.3| unnamed protein product [Vitis vinifera]               63   2e-08
emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]    63   2e-08

>ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   GKVQEAQELVSDLLILNGVEDKAILLPFLEFLL--SGDEPELCQDLLQKIEQLHHKERPL 174
           G+VQEAQ+LVSDL+   G+E++  + P +EFL+    D+P+ C  L++ IEQ+H+KERP+
Sbjct: 816 GRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPI 875

Query: 175 I 177
           I
Sbjct: 876 I 876


>emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1    GKVQEAQELVSDLLILNGVEDKAILLPFLEFLL--SGDEPELCQDLLQKIEQLHHKERPL 174
            G+VQEAQ+LVSDL+   G+E++  + P +EFL+    D+P+ C  L++ IEQ+H+KERP+
Sbjct: 823  GRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPI 882

Query: 175  I 177
            I
Sbjct: 883  I 883


>emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/61 (49%), Positives = 46/61 (75%), Gaps = 2/61 (3%)
 Frame = +1

Query: 1   GKVQEAQELVSDLLILNGVEDKAILLPFLEFLL--SGDEPELCQDLLQKIEQLHHKERPL 174
           G+VQEAQ+LVSDL+   G+E++  + P +EFL+    D+P+ C  L++ IEQ+H+KERP+
Sbjct: 773 GRVQEAQKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKERPI 832

Query: 175 I 177
           I
Sbjct: 833 I 833


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