BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030067
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|2...   411   e-112
ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus ...   404   e-110
ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana] gi|2...   387   e-105
ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-lik...   386   e-105
ref|XP_003529327.1| PREDICTED: GTP-binding protein At2g22870-lik...   385   e-104

>ref|XP_002310331.1| predicted protein [Populus trichocarpa] gi|222853234|gb|EEE90781.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  411 bits (1056), Expect = e-112
 Identities = 200/280 (71%), Positives = 230/280 (82%), Gaps = 2/280 (0%)
 Frame = -3

Query: 943 PFPQILCLHKPFSQTIHQTPTSTQHVTASKTTGPQQQTE--QFVKTTLFIPPGVEPDSIT 770
           PFP     +    +  ++ P+   HV+ASKT+ P   ++  +FV+T LF+PPGV+PD +T
Sbjct: 24  PFPLTFSFNYSTREPPNRNPSG--HVSASKTSKPPPLSDVARFVRTVLFVPPGVDPDKVT 81

Query: 769 EDMILPFSNIVIGPYAGHSQIKQVEFVKSSGKAKDCPKNGLPEFAILGRSNVGKSSLINT 590
           E++ILP SNIV+GPYAGHSQIK+VEFVKSSG+AKDCP++  PEFAILGRSNVGKSSLIN 
Sbjct: 82  EEIILPGSNIVVGPYAGHSQIKEVEFVKSSGRAKDCPRDDRPEFAILGRSNVGKSSLINV 141

Query: 589 LVRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARNDWSSFTKGYFLN 410
           L RKKEVALTSKKPGKTQLINHFLVNKSWY+VDLPGYGFA AP+SAR DWSSFTKGYFLN
Sbjct: 142 LARKKEVALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPDSARMDWSSFTKGYFLN 201

Query: 409 RXXXXXXXXXXXXSTPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGNKGNRPEENIKDF 230
           R            S PP+KIDLDCANWLGRNNIPMT VFTKCDK KG K  RP+ENIK+F
Sbjct: 202 RETLVAVLLLIDASVPPQKIDLDCANWLGRNNIPMTLVFTKCDKMKGGKRTRPDENIKNF 261

Query: 229 QQLIRENYRKPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 110
           Q+L+R+NYR+ P WIMTSSVTGLGRDELLLHMSQLRNYWD
Sbjct: 262 QELMRQNYREHPAWIMTSSVTGLGRDELLLHMSQLRNYWD 301


>ref|XP_002525297.1| GTP-binding protein engB, putative [Ricinus communis]
           gi|223535455|gb|EEF37125.1| GTP-binding protein engB,
           putative [Ricinus communis]
          Length = 296

 Score =  404 bits (1037), Expect = e-110
 Identities = 195/270 (72%), Positives = 223/270 (82%), Gaps = 3/270 (1%)
 Frame = -3

Query: 910 FSQTIHQTPTSTQH--VTASKTTGPQQ-QTEQFVKTTLFIPPGVEPDSITEDMILPFSNI 740
           F+   H +  S+ H   +ASKT  P    + +F +T LF+PPGV+PD +TE+M+LP SNI
Sbjct: 26  FTIAFHFSAQSSPHPKFSASKTAKPSTADSARFARTVLFVPPGVDPDEVTENMVLPGSNI 85

Query: 739 VIGPYAGHSQIKQVEFVKSSGKAKDCPKNGLPEFAILGRSNVGKSSLINTLVRKKEVALT 560
           V+GPYAGHSQIK+VEFVKSS +A+DCP+   PEFAILGRSNVGKSSLIN LVRKKEVALT
Sbjct: 86  VVGPYAGHSQIKEVEFVKSSSRARDCPREDRPEFAILGRSNVGKSSLINALVRKKEVALT 145

Query: 559 SKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARNDWSSFTKGYFLNRXXXXXXXXX 380
           SKKPGKTQLINHFLVNKSWYIVDLPGYGFA AP SA+ DWSSFTKGYFLNR         
Sbjct: 146 SKKPGKTQLINHFLVNKSWYIVDLPGYGFAKAPASAQTDWSSFTKGYFLNRETLVAVLLL 205

Query: 379 XXXSTPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGNKGNRPEENIKDFQQLIRENYRK 200
              S PP+KIDLDCA+WLGRNNIP+TFVFTKCDK KG K  RP+ENI++FQ+LIR+NY++
Sbjct: 206 IDASVPPQKIDLDCADWLGRNNIPLTFVFTKCDKMKGGKSTRPDENIRNFQELIRQNYQE 265

Query: 199 PPPWIMTSSVTGLGRDELLLHMSQLRNYWD 110
            PPWIMTSSVTGLGRDELLLHMSQLRNYWD
Sbjct: 266 HPPWIMTSSVTGLGRDELLLHMSQLRNYWD 295


>ref|NP_565543.1| GTP-binding protein [Arabidopsis thaliana]
           gi|21903474|sp|O81004.2|Y2287_ARATH RecName:
           Full=GTP-binding protein At2g22870; AltName:
           Full=Protein EMBRYO DEFECTIVE 2001
           gi|20197273|gb|AAC32434.2| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|21592880|gb|AAM64830.1| putative nucleotide-binding
           protein [Arabidopsis thaliana]
           gi|52354269|gb|AAU44455.1| hypothetical protein
           AT2G22870 [Arabidopsis thaliana]
           gi|55740571|gb|AAV63878.1| hypothetical protein
           At2g22870 [Arabidopsis thaliana]
           gi|330252273|gb|AEC07367.1| GTP-binding protein
           [Arabidopsis thaliana]
          Length = 300

 Score =  387 bits (994), Expect = e-105
 Identities = 190/276 (68%), Positives = 219/276 (79%)
 Frame = -3

Query: 937 PQILCLHKPFSQTIHQTPTSTQHVTASKTTGPQQQTEQFVKTTLFIPPGVEPDSITEDMI 758
           P  + + K  + T    PT+T + + S  T       +F K+ LFIPPGVE + +T+DM+
Sbjct: 33  PNFISIPKISAST--NNPTTTTNRSISDAT-------KFAKSVLFIPPGVEIEELTDDMV 83

Query: 757 LPFSNIVIGPYAGHSQIKQVEFVKSSGKAKDCPKNGLPEFAILGRSNVGKSSLINTLVRK 578
           LP SNIVIGP+AGHSQIK+VEFVKSS +A+DCPK+  PE AILGRSNVGKSSLIN LVRK
Sbjct: 84  LPGSNIVIGPFAGHSQIKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRK 143

Query: 577 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARNDWSSFTKGYFLNRXXX 398
           KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFA   ++A+ DWS+FTKGYFLNR   
Sbjct: 144 KEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSL 203

Query: 397 XXXXXXXXXSTPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGNKGNRPEENIKDFQQLI 218
                    S PP+KIDLDCANWLGRNN+PMTFVFTKCDK K  KG RP+ENIK FQQ+I
Sbjct: 204 VCVLLLIDASVPPQKIDLDCANWLGRNNVPMTFVFTKCDKMKATKGKRPDENIKAFQQII 263

Query: 217 RENYRKPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 110
           REN++  PPWI+TSSV+GLGRDELLLHMSQLRNYWD
Sbjct: 264 RENFKVHPPWILTSSVSGLGRDELLLHMSQLRNYWD 299


>ref|XP_003541533.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
          Length = 305

 Score =  386 bits (992), Expect = e-105
 Identities = 181/251 (72%), Positives = 209/251 (83%)
 Frame = -3

Query: 862 ASKTTGPQQQTEQFVKTTLFIPPGVEPDSITEDMILPFSNIVIGPYAGHSQIKQVEFVKS 683
           ASKT           ++ LFIPPG+EPD + +  +LP SNI +GPYAG S+IK V+FVKS
Sbjct: 54  ASKTPTTNPLPSSSFESQLFIPPGIEPDEVDDSTVLPGSNIAVGPYAGDSRIKDVQFVKS 113

Query: 682 SGKAKDCPKNGLPEFAILGRSNVGKSSLINTLVRKKEVALTSKKPGKTQLINHFLVNKSW 503
           S +A+DCPK+ LPEFA+LGRSNVGKSSLIN+LVRKKE+ALTSKKPGKTQLINHFLVNKSW
Sbjct: 114 SARARDCPKDDLPEFAVLGRSNVGKSSLINSLVRKKEIALTSKKPGKTQLINHFLVNKSW 173

Query: 502 YIVDLPGYGFANAPESARNDWSSFTKGYFLNRXXXXXXXXXXXXSTPPRKIDLDCANWLG 323
           Y+VDLPGYGFA APE+A+ DWSSFTKGYFLNR            S PP+K+DLDCANWLG
Sbjct: 174 YLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNRSTLVAVLLLIDASVPPQKVDLDCANWLG 233

Query: 322 RNNIPMTFVFTKCDKSKGNKGNRPEENIKDFQQLIRENYRKPPPWIMTSSVTGLGRDELL 143
           RNNIP+TFVFTKCDK K  KG RP+ENI+DFQ+LIR+NY++ PPWIMTSSVTG+GRDELL
Sbjct: 234 RNNIPITFVFTKCDKMKVAKGKRPDENIRDFQELIRQNYKQHPPWIMTSSVTGMGRDELL 293

Query: 142 LHMSQLRNYWD 110
           LHMSQLRNYWD
Sbjct: 294 LHMSQLRNYWD 304


>ref|XP_003529327.1| PREDICTED: GTP-binding protein At2g22870-like [Glycine max]
          Length = 301

 Score =  385 bits (988), Expect = e-104
 Identities = 186/279 (66%), Positives = 215/279 (77%)
 Frame = -3

Query: 946 PPFPQILCLHKPFSQTIHQTPTSTQHVTASKTTGPQQQTEQFVKTTLFIPPGVEPDSITE 767
           P  P +     P S + H          ASKTT     + +F    LFIPPG+EPD + +
Sbjct: 35  PTPPSLFSFRHPLSHSTH----------ASKTTTSPPPSFEF---QLFIPPGIEPDEVND 81

Query: 766 DMILPFSNIVIGPYAGHSQIKQVEFVKSSGKAKDCPKNGLPEFAILGRSNVGKSSLINTL 587
             +LP SNI +GPYAG S IK V+FVKSS +A+DCPK+  PEFA+LGRSNVGKSSLIN+L
Sbjct: 82  STVLPGSNIAVGPYAGDSHIKDVQFVKSSARARDCPKDNRPEFAVLGRSNVGKSSLINSL 141

Query: 586 VRKKEVALTSKKPGKTQLINHFLVNKSWYIVDLPGYGFANAPESARNDWSSFTKGYFLNR 407
           VRKKE+ALTSKKPGKTQLINHFLVNKSWY+VDLPGYGFA APE+A+ DWSSFTKGYFLN+
Sbjct: 142 VRKKEIALTSKKPGKTQLINHFLVNKSWYLVDLPGYGFAKAPEAAKTDWSSFTKGYFLNK 201

Query: 406 XXXXXXXXXXXXSTPPRKIDLDCANWLGRNNIPMTFVFTKCDKSKGNKGNRPEENIKDFQ 227
                       S PP+KIDLDCANWLGRNNIP+TFVFTKCDK K  KG RP+ENI+DFQ
Sbjct: 202 STLVAVLLLIDASVPPQKIDLDCANWLGRNNIPITFVFTKCDKMKVAKGKRPDENIRDFQ 261

Query: 226 QLIRENYRKPPPWIMTSSVTGLGRDELLLHMSQLRNYWD 110
           +LIR+NY++ PPWIMTSS TG+GRDELLLHMSQLRNYWD
Sbjct: 262 ELIRQNYKQHPPWIMTSSATGMGRDELLLHMSQLRNYWD 300