BLASTX nr result

ID: Coptis23_contig00030064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030064
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|222845309|gb|EEE82856.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/86 (31%), Positives = 43/86 (50%)
 Frame = -1

Query: 361 MKVQNXXXXXXXXLVILSVCQFSSRSYSYRTLRETPDTRLRTQLLSQNTWSLXXXXXXXX 182
           M++ N        ++IL++ Q SS  Y +  +R+  +  + T + +Q +W          
Sbjct: 1   MRIPNPRRSFLFLMIILAISQLSSCRYLHINIRDQTNQTVETDVSTQFSWHFTAKAPEGS 60

Query: 181 XXXXNVDKIYGASSKLVPGGPNPLHN 104
                 D +YGAS + VPGGPNPLHN
Sbjct: 61  NKDEIDDPVYGASYRTVPGGPNPLHN 86


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