BLASTX nr result

ID: Coptis23_contig00030038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030038
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP82017.1| putative tryptophan synthase alpha chain, partial...   149   3e-34
ref|XP_004145375.1| PREDICTED: indole-3-glycerol phosphate lyase...   148   4e-34
gb|ACJ02772.1| indole-3-glycerol phosphate lyase IGL1 [Lamium ga...   147   1e-33
emb|CAH56477.1| tryptophan synthase, alpha subunit (TSA1) [Isati...   146   1e-33
ref|NP_001059049.1| Os07g0182100 [Oryza sativa Japonica Group] g...   146   1e-33

>gb|AAP82017.1| putative tryptophan synthase alpha chain, partial [Brassica
           oleracea var. capitata]
          Length = 226

 Score =  149 bits (375), Expect = 3e-34
 Identities = 70/98 (71%), Positives = 84/98 (85%)
 Frame = +3

Query: 3   SDVIELGIPFSDPIADGPVIQAACTRALANGTSLDSTMSMLKKVLPEISCPVTLFTYYNV 182
           SD+IELG+P+SDP+ADGPVIQAA TR+L  GT+LDS + ML KVLPE+SCPV+LFTYYN 
Sbjct: 6   SDIIELGVPYSDPLADGPVIQAAATRSLEKGTNLDSILDMLDKVLPELSCPVSLFTYYNP 65

Query: 183 IHKRGIGNFMAALNDAGVHGLVVPDVRLEETAYLRKEA 296
           I KRG+G FM+++ D GV GLVVPDV LEET +LRKEA
Sbjct: 66  ILKRGLGKFMSSIRDVGVQGLVVPDVPLEETEFLRKEA 103


>ref|XP_004145375.1| PREDICTED: indole-3-glycerol phosphate lyase, chloroplastic-like
           [Cucumis sativus] gi|449522017|ref|XP_004168025.1|
           PREDICTED: indole-3-glycerol phosphate lyase,
           chloroplastic-like [Cucumis sativus]
          Length = 312

 Score =  148 bits (374), Expect = 4e-34
 Identities = 70/100 (70%), Positives = 84/100 (84%)
 Frame = +3

Query: 3   SDVIELGIPFSDPIADGPVIQAACTRALANGTSLDSTMSMLKKVLPEISCPVTLFTYYNV 182
           SD+IELG+P+SDP+ADGPVIQAA TR+LA GT+  + +SMLK+V+PE+SCP+ LF+YYN 
Sbjct: 92  SDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPIALFSYYNP 151

Query: 183 IHKRGIGNFMAALNDAGVHGLVVPDVRLEETAYLRKEAAK 302
           I KRGIGNFM  + DAGV GLVVPDV LEET  LRKEA K
Sbjct: 152 ILKRGIGNFMLTIKDAGVRGLVVPDVPLEETEILRKEAVK 191


>gb|ACJ02772.1| indole-3-glycerol phosphate lyase IGL1 [Lamium galeobdolon]
          Length = 313

 Score =  147 bits (370), Expect = 1e-33
 Identities = 69/98 (70%), Positives = 82/98 (83%)
 Frame = +3

Query: 3   SDVIELGIPFSDPIADGPVIQAACTRALANGTSLDSTMSMLKKVLPEISCPVTLFTYYNV 182
           SD+IELG+P+SDP+ADGPVIQAA +RALA GT+ D  ++MLK+V+P++SCPV LFTYYN 
Sbjct: 93  SDIIELGVPYSDPLADGPVIQAAASRALARGTNFDKIIAMLKEVVPQLSCPVALFTYYNP 152

Query: 183 IHKRGIGNFMAALNDAGVHGLVVPDVRLEETAYLRKEA 296
           I KRG G FMA L D G+HGLVVPDV LEET  LRKEA
Sbjct: 153 ILKRGAGKFMATLQDTGIHGLVVPDVPLEETEILRKEA 190


>emb|CAH56477.1| tryptophan synthase, alpha subunit (TSA1) [Isatis tinctoria]
           gi|52673242|emb|CAH56478.1| tryptophan synthase, alpha
           subunit (TSA1) [Isatis tinctoria]
          Length = 311

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/98 (70%), Positives = 83/98 (84%)
 Frame = +3

Query: 3   SDVIELGIPFSDPIADGPVIQAACTRALANGTSLDSTMSMLKKVLPEISCPVTLFTYYNV 182
           SD+IELG+P+SDP+ADGPVIQAA TRAL NGT+LD+ + ML KVLP++SCPV+LFTYYN 
Sbjct: 91  SDIIELGVPYSDPLADGPVIQAAATRALENGTNLDNILDMLDKVLPQVSCPVSLFTYYNP 150

Query: 183 IHKRGIGNFMAALNDAGVHGLVVPDVRLEETAYLRKEA 296
           I KRG+G FM+++ D GV GLV PDV LEET  LRKEA
Sbjct: 151 ILKRGLGKFMSSIRDVGVQGLVEPDVPLEETEMLRKEA 188


>ref|NP_001059049.1| Os07g0182100 [Oryza sativa Japonica Group]
           gi|34393530|dbj|BAC83113.1| putative tryptophan synthase
           alpha chain [Oryza sativa Japonica Group]
           gi|113610585|dbj|BAF20963.1| Os07g0182100 [Oryza sativa
           Japonica Group] gi|215678936|dbj|BAG96366.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215694914|dbj|BAG90105.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 329

 Score =  146 bits (369), Expect = 1e-33
 Identities = 69/100 (69%), Positives = 84/100 (84%)
 Frame = +3

Query: 3   SDVIELGIPFSDPIADGPVIQAACTRALANGTSLDSTMSMLKKVLPEISCPVTLFTYYNV 182
           SD+IELG+P+SDP+ADGPVIQA+ TRAL+ GT+ +  +SM+K+V+PE+SCPV LFTYYN 
Sbjct: 109 SDLIELGVPYSDPLADGPVIQASATRALSKGTTFEDVISMVKEVIPELSCPVALFTYYNP 168

Query: 183 IHKRGIGNFMAALNDAGVHGLVVPDVRLEETAYLRKEAAK 302
           I KRGI NFM  + +AGVHGLVVPDV LEET  LR EAAK
Sbjct: 169 ILKRGIANFMTVVKEAGVHGLVVPDVPLEETNILRSEAAK 208


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