BLASTX nr result

ID: Coptis23_contig00030034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030034
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267731.1| PREDICTED: B3 domain-containing protein Os04...   121   2e-25
emb|CAN73443.1| hypothetical protein VITISV_020729 [Vitis vinifera]   120   3e-25
emb|CBI39994.3| unnamed protein product [Vitis vinifera]              118   1e-24
ref|NP_001142732.1| uncharacterized protein LOC100275071 [Zea ma...   103   5e-20
ref|XP_003581144.1| PREDICTED: B3 domain-containing protein Os04...    99   9e-19

>ref|XP_002267731.1| PREDICTED: B3 domain-containing protein Os04g0386900 [Vitis
           vinifera]
          Length = 191

 Score =  121 bits (304), Expect = 2e-25
 Identities = 59/121 (48%), Positives = 81/121 (66%)
 Frame = +1

Query: 220 KQYFHCILSKSHVLKNYLMALPVKISCILPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 399
           K YFH +L KSH+ +   M LP K+   +P AV+P VL  ++K W+M + G+  +HKRFD
Sbjct: 74  KPYFHVVLVKSHLNQ---MVLPTKMHPSVPSAVIPAVLVHQDKRWEMTFNGDHRTHKRFD 130

Query: 400 SGWKIFVVNNKLKVGDGCVFELTECTSDCIKFRVQFLDGELPPNFTDRIDGKSSASPIVI 579
            GW+ FV +N LK GD CVFEL EC +  IKFRVQ L G++P    DR +G++S + IVI
Sbjct: 131 IGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRANGETSDTAIVI 190

Query: 580 D 582
           +
Sbjct: 191 E 191


>emb|CAN73443.1| hypothetical protein VITISV_020729 [Vitis vinifera]
          Length = 160

 Score =  120 bits (302), Expect = 3e-25
 Identities = 59/121 (48%), Positives = 80/121 (66%)
 Frame = +1

Query: 220 KQYFHCILSKSHVLKNYLMALPVKISCILPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 399
           K YFH +L KSH+ +   M LP K+   +P AV+P VL  + K W+M + G+  +HKRFD
Sbjct: 43  KPYFHVVLVKSHLNQ---MVLPTKMHPSVPSAVIPAVLVHQXKRWEMTFNGDHRTHKRFD 99

Query: 400 SGWKIFVVNNKLKVGDGCVFELTECTSDCIKFRVQFLDGELPPNFTDRIDGKSSASPIVI 579
            GW+ FV +N LK GD CVFEL EC +  IKFRVQ L G++P    DR +G++S + IVI
Sbjct: 100 IGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRANGETSDTAIVI 159

Query: 580 D 582
           +
Sbjct: 160 E 160


>emb|CBI39994.3| unnamed protein product [Vitis vinifera]
          Length = 210

 Score =  118 bits (296), Expect = 1e-24
 Identities = 58/126 (46%), Positives = 83/126 (65%)
 Frame = +1

Query: 220 KQYFHCILSKSHVLKNYLMALPVKISCILPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 399
           K YFH +L KSH+ +   M LP K+   +P AV+P VL  ++K W+M + G+  +HKRFD
Sbjct: 74  KPYFHVVLVKSHLNQ---MVLPTKMHPSVPSAVIPAVLVHQDKRWEMTFNGDHRTHKRFD 130

Query: 400 SGWKIFVVNNKLKVGDGCVFELTECTSDCIKFRVQFLDGELPPNFTDRIDGKSSASPIVI 579
            GW+ FV +N LK GD CVFEL EC +  IKFRVQ L G++P    DR +G++S + I+ 
Sbjct: 131 IGWRTFVNDNNLKAGDACVFELMECNTSNIKFRVQILRGDIPSMLLDRANGETSDTAILK 190

Query: 580 D*VSWI 597
             +S++
Sbjct: 191 FVISFV 196


>ref|NP_001142732.1| uncharacterized protein LOC100275071 [Zea mays]
           gi|195608904|gb|ACG26282.1| hypothetical protein [Zea
           mays] gi|413918129|gb|AFW58061.1| hypothetical protein
           ZEAMMB73_242659 [Zea mays]
          Length = 159

 Score =  103 bits (257), Expect = 5e-20
 Identities = 49/121 (40%), Positives = 76/121 (62%)
 Frame = +1

Query: 220 KQYFHCILSKSHVLKNYLMALPVKISCILPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 399
           K YF CIL KSHV + + + +P  ++  LP   VP  +T   + W+M + G G   +R +
Sbjct: 40  KPYFTCILCKSHVNQPFQVVVPKSLAPFLPGTTVPATVTWHGRSWEMRFTG-GRQIQRLE 98

Query: 400 SGWKIFVVNNKLKVGDGCVFELTECTSDCIKFRVQFLDGELPPNFTDRIDGKSSASPIVI 579
           +GW+ F ++N LK+GDGCVFEL +  ++ + FRVQ L  ++P    +R  G +S+SPI+I
Sbjct: 99  AGWRGFALDNGLKLGDGCVFELVDGRAERVVFRVQVLRADIPAEIRERAGGYTSSSPILI 158

Query: 580 D 582
           D
Sbjct: 159 D 159


>ref|XP_003581144.1| PREDICTED: B3 domain-containing protein Os04g0386900-like
           [Brachypodium distachyon]
          Length = 214

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 46/121 (38%), Positives = 73/121 (60%)
 Frame = +1

Query: 220 KQYFHCILSKSHVLKNYLMALPVKISCILPQAVVPVVLTCRNKIWKMNYLGEGSSHKRFD 399
           K YF C++ +SH+   + + +P  ++  LP    P  LT + + W+M + G G   +R D
Sbjct: 93  KPYFACVVCRSHIQPPFQVVVPRSLAPFLPPKPAPATLTWQGRSWEMRFTG-GRPIQRLD 151

Query: 400 SGWKIFVVNNKLKVGDGCVFELTECTSDCIKFRVQFLDGELPPNFTDRIDGKSSASPIVI 579
           +GW+ F V+N L++GDGCVFEL     + + F+VQ L  E+P    +R  G +S+SPIVI
Sbjct: 152 AGWRSFAVDNALRLGDGCVFELVSGEGEGVVFQVQVLRAEIPARIRERAGGYNSSSPIVI 211

Query: 580 D 582
           +
Sbjct: 212 E 212


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