BLASTX nr result

ID: Coptis23_contig00030028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030028
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM18727.1|AC092548_5 putative TNP2-like transposon protein [...   139   2e-31
gb|AAP53328.2| transposon protein, putative, CACTA, En/Spm sub-c...   139   2e-31
gb|AAD55677.1| putative transposase protein [Zea mays]                135   3e-30
ref|XP_003631713.1| PREDICTED: uncharacterized protein LOC100263...   135   5e-30
ref|XP_003631805.1| PREDICTED: uncharacterized protein LOC100248...   134   8e-30

>gb|AAM18727.1|AC092548_5 putative TNP2-like transposon protein [Oryza sativa Japonica Group]
          Length = 1571

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/109 (56%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = -1

Query: 321 PPSLCMRKEFVMLTLLIPS--NPGDEIDVYLQPLIEELRNLWSKGAETYDSCSKKTFNMR 148
           PP +C++++ VML++L+P    PGD IDVYLQPLIEEL  LW  G +TYDS +K  F +R
Sbjct: 367 PPWMCIKQQNVMLSMLLPGPDGPGDAIDVYLQPLIEELIELWEDGVDTYDSSTKTNFKLR 426

Query: 147 AILLWTIHDLPAYGHVSGRRTAGRYACPVCSEGIESKWLTNGKKFSYMG 1
           A LLWT+HD PAYG++SG  T G+ ACPVC +   S WL  G+KF YMG
Sbjct: 427 AALLWTVHDFPAYGNISGHSTKGKLACPVCHKETNSMWLKKGQKFCYMG 475


>gb|AAP53328.2| transposon protein, putative, CACTA, En/Spm sub-class [Oryza sativa
           Japonica Group]
          Length = 1647

 Score =  139 bits (350), Expect = 2e-31
 Identities = 62/109 (56%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = -1

Query: 321 PPSLCMRKEFVMLTLLIPS--NPGDEIDVYLQPLIEELRNLWSKGAETYDSCSKKTFNMR 148
           PP +C++++ VML++L+P    PGD IDVYLQPLIEEL  LW  G +TYDS +K  F +R
Sbjct: 367 PPWMCIKQQNVMLSMLLPGPDGPGDAIDVYLQPLIEELIELWEDGVDTYDSSTKTNFKLR 426

Query: 147 AILLWTIHDLPAYGHVSGRRTAGRYACPVCSEGIESKWLTNGKKFSYMG 1
           A LLWT+HD PAYG++SG  T G+ ACPVC +   S WL  G+KF YMG
Sbjct: 427 AALLWTVHDFPAYGNISGHSTKGKLACPVCHKETNSMWLKKGQKFCYMG 475


>gb|AAD55677.1| putative transposase protein [Zea mays]
          Length = 793

 Score =  135 bits (340), Expect = 3e-30
 Identities = 62/109 (56%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = -1

Query: 321 PPSLCMRKEFVMLTLLIP--SNPGDEIDVYLQPLIEELRNLWSKGAETYDSCSKKTFNMR 148
           PP LC+++ F ML++LIP  ++PG+ IDVYLQPLI+EL++LW KG ET+D+  KK FN+R
Sbjct: 352 PPWLCLKQPFWMLSMLIPGKNSPGNNIDVYLQPLIDELKDLWEKGVETWDAKEKKNFNLR 411

Query: 147 AILLWTIHDLPAYGHVSGRRTAGRYACPVCSEGIESKWLTNGKKFSYMG 1
           AILLWTI+D PAYG +SG  T G++ACP C +  +  WL  G K  YMG
Sbjct: 412 AILLWTINDFPAYGMLSGWSTKGKFACPYCHKDTDFLWLKCGSKHCYMG 460


>ref|XP_003631713.1| PREDICTED: uncharacterized protein LOC100263769 [Vitis vinifera]
          Length = 1493

 Score =  135 bits (339), Expect = 5e-30
 Identities = 61/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = -1

Query: 321 PPSLCMRKEFVMLTLLI--PSNPGDEIDVYLQPLIEELRNLWSKGAETYDSCSKKTFNMR 148
           PP LCM+++F+ML+LLI  P  PG  IDVYL PL+++L+ LW KG ETYD+  ++ F ++
Sbjct: 566 PPWLCMKRKFMMLSLLISGPRQPGKNIDVYLSPLVDDLKTLWEKGVETYDAHLREVFTLK 625

Query: 147 AILLWTIHDLPAYGHVSGRRTAGRYACPVCSEGIESKWLTNGKKFSYMG 1
           AILLWTI+D PAYG+++G    G YACP+C EG  SK L +G+K SYMG
Sbjct: 626 AILLWTINDFPAYGNLAGCTVKGYYACPICGEGTYSKRLKHGRKNSYMG 674


>ref|XP_003631805.1| PREDICTED: uncharacterized protein LOC100248429 [Vitis vinifera]
          Length = 953

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/109 (55%), Positives = 82/109 (75%), Gaps = 2/109 (1%)
 Frame = -1

Query: 321 PPSLCMRKEFVMLTLLI--PSNPGDEIDVYLQPLIEELRNLWSKGAETYDSCSKKTFNMR 148
           PP LCM+++F+ML+LLI  P  PG  IDVYL PL+++L+ LW KG ETYD+  ++ F ++
Sbjct: 338 PPWLCMKRKFMMLSLLISGPRQPGKNIDVYLSPLVDDLKTLWEKGVETYDAHLREVFTLK 397

Query: 147 AILLWTIHDLPAYGHVSGRRTAGRYACPVCSEGIESKWLTNGKKFSYMG 1
           AI+LWTI+D PAYG+++G    G YACP+C EG  SK L +G+K SYMG
Sbjct: 398 AIILWTINDFPAYGNLAGCTVKGYYACPICGEGTYSKRLKHGRKNSYMG 446


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