BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030019
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172171.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-co...   226   3e-57
ref|XP_004150033.1| PREDICTED: WD repeat-containing protein 11-l...   226   3e-57
ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-l...   224   7e-57
ref|XP_003609372.1| WD repeat-containing protein [Medicago trunc...   221   6e-56
ref|XP_003541474.1| PREDICTED: WD repeat-containing protein 11-l...   218   6e-55

>ref|XP_004172171.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           11-like, partial [Cucumis sativus]
          Length = 490

 Score =  226 bits (575), Expect = 3e-57
 Identities = 110/184 (59%), Positives = 136/184 (73%), Gaps = 1/184 (0%)
 Frame = -3

Query: 551 HETWDCMLPGPPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQXXXXXXXXXXXXXXX 372
           H++WDCMLPGPPSRNN GS+D + SGLLA+ +GSSVSI+D+RSMQ               
Sbjct: 21  HDSWDCMLPGPPSRNNFGSADISPSGLLAFPSGSSVSIVDSRSMQLITAIPMPPPSTTAT 80

Query: 371 L-APFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKMDPTDP 195
             +PFVTSVRWTP PL RD+L+ EPS SHL LA  DRQGRI+L D RLK   +  D +D 
Sbjct: 81  SLSPFVTSVRWTPLPLHRDLLSTEPSTSHLHLAAADRQGRIALLDFRLKSPTIWFDTSDY 140

Query: 194 SKLLGIQDLCWIQSKPDSWILASINGPSLLSLYNTSTGRCIWKYDASPEFFSCIRRDPFD 15
               G+QDLCW++S PDS++LA+I+G S LSLY+ +T RC+WKYDASPE+ SCIR DPFD
Sbjct: 141 K--YGVQDLCWVRSGPDSYLLAAIHGASALSLYSVTTARCVWKYDASPEYLSCIRYDPFD 198

Query: 14  ARHF 3
           +RHF
Sbjct: 199 SRHF 202


>ref|XP_004150033.1| PREDICTED: WD repeat-containing protein 11-like [Cucumis sativus]
          Length = 1327

 Score =  226 bits (575), Expect = 3e-57
 Identities = 110/184 (59%), Positives = 136/184 (73%), Gaps = 1/184 (0%)
 Frame = -3

Query: 551 HETWDCMLPGPPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQXXXXXXXXXXXXXXX 372
           H++WDCMLPGPPSRNN GS+D + SGLLA+ +GSSVSI+D+RSMQ               
Sbjct: 21  HDSWDCMLPGPPSRNNFGSADISPSGLLAFPSGSSVSIVDSRSMQLITAIPMPPPSTTAT 80

Query: 371 L-APFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKMDPTDP 195
             +PFVTSVRWTP PL RD+L+ EPS SHL LA  DRQGRI+L D RLK   +  D +D 
Sbjct: 81  SLSPFVTSVRWTPLPLHRDLLSTEPSTSHLHLAAADRQGRIALLDFRLKSPTIWFDTSDY 140

Query: 194 SKLLGIQDLCWIQSKPDSWILASINGPSLLSLYNTSTGRCIWKYDASPEFFSCIRRDPFD 15
               G+QDLCW++S PDS++LA+I+G S LSLY+ +T RC+WKYDASPE+ SCIR DPFD
Sbjct: 141 K--YGVQDLCWVRSGPDSYLLAAIHGASALSLYSVTTARCVWKYDASPEYLSCIRYDPFD 198

Query: 14  ARHF 3
           +RHF
Sbjct: 199 SRHF 202


>ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-like [Vitis vinifera]
          Length = 1317

 Score =  224 bits (572), Expect = 7e-57
 Identities = 111/200 (55%), Positives = 140/200 (70%), Gaps = 13/200 (6%)
 Frame = -3

Query: 566 MSRLAHETWDCMLPGPPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQXXXXXXXXXX 387
           M+R  HE+WDCMLPGPPSRNN GS+DC  SGLLA+ + SSVS++D+RSMQ          
Sbjct: 1   MARPPHESWDCMLPGPPSRNNGGSADCHPSGLLAFPSSSSVSVVDSRSMQLVSVLPMPPP 60

Query: 386 XXXXXL-------------APFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISL 246
                              +PFVTSVRW P PL  D+  ++    HL+LA GDRQGRI+L
Sbjct: 61  TGTSSSNTNSAASSSSSSLSPFVTSVRWAPFPLPHDLTNYQ----HLLLAAGDRQGRIAL 116

Query: 245 YDVRLKLLILKMDPTDPSKLLGIQDLCWIQSKPDSWILASINGPSLLSLYNTSTGRCIWK 66
           +D RL+ ++L  + +DP+   GIQDLCW+Q + D W+LAS++GPSLLS++N STGRCIWK
Sbjct: 117 FDFRLRSVLLWFE-SDPASKPGIQDLCWVQGRSD-WVLASLSGPSLLSIWNASTGRCIWK 174

Query: 65  YDASPEFFSCIRRDPFDARH 6
           YD SPEFFSCIRRDPFD+RH
Sbjct: 175 YDVSPEFFSCIRRDPFDSRH 194


>ref|XP_003609372.1| WD repeat-containing protein [Medicago truncatula]
           gi|355510427|gb|AES91569.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 1581

 Score =  221 bits (564), Expect = 6e-56
 Identities = 114/180 (63%), Positives = 134/180 (74%)
 Frame = -3

Query: 548 ETWDCMLPGPPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQXXXXXXXXXXXXXXXL 369
           E+W+ MLPGP SRNN GSSD   +GLLA+ +GSS+SI+DTRSMQ                
Sbjct: 30  ESWESMLPGPSSRNNFGSSDLNPNGLLAFPSGSSISIVDTRSMQLLSAFPIPPPPSSA-- 87

Query: 368 APFVTSVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKMDPTDPSK 189
           APFVTSVRW P PL R +L+ EPS+SHL+LA GDRQGRI+L D RLK  IL  + TD   
Sbjct: 88  APFVTSVRWIPLPLNRHLLSSEPSSSHLLLAAGDRQGRIALLDFRLKSAILWFE-TDSK- 145

Query: 188 LLGIQDLCWIQSKPDSWILASINGPSLLSLYNTSTGRCIWKYDASPEFFSCIRRDPFDAR 9
            LGIQDLCWIQ++PD  ILA+I GPS LSL+N STGRC+WKYDASPE+FSCIRRD FD+R
Sbjct: 146 -LGIQDLCWIQARPDLLILAAITGPSTLSLFNGSTGRCVWKYDASPEYFSCIRRDAFDSR 204


>ref|XP_003541474.1| PREDICTED: WD repeat-containing protein 11-like [Glycine max]
          Length = 1252

 Score =  218 bits (555), Expect = 6e-55
 Identities = 107/175 (61%), Positives = 134/175 (76%)
 Frame = -3

Query: 533 MLPGPPSRNNAGSSDCTTSGLLAYGAGSSVSIIDTRSMQXXXXXXXXXXXXXXXLAPFVT 354
           MLPGPPSRNN GS+D +  GL+A+ +GSS+SI+DTRSMQ                APFVT
Sbjct: 1   MLPGPPSRNNFGSADLSPHGLMAFPSGSSISIVDTRSMQLLSSFPIPPPPSSA--APFVT 58

Query: 353 SVRWTPQPLRRDILTHEPSNSHLILAVGDRQGRISLYDVRLKLLILKMDPTDPSKLLGIQ 174
           ++RW+P PL R +L+ EPS++HL+LA  DRQGRI+L D RLK  +L  D TD  +  G+Q
Sbjct: 59  ALRWSPLPLSRHLLSSEPSSNHLLLAAADRQGRIALLDFRLKSALLWFD-TDSKQ--GVQ 115

Query: 173 DLCWIQSKPDSWILASINGPSLLSLYNTSTGRCIWKYDASPEFFSCIRRDPFDAR 9
           DLCW Q++PDS++LA+INGPS LSLYN STGRC+WKYDASPE+FSCIRRDPFD+R
Sbjct: 116 DLCWAQARPDSYLLAAINGPSTLSLYNASTGRCVWKYDASPEYFSCIRRDPFDSR 170