BLASTX nr result

ID: Coptis23_contig00030004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030004
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330236.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_004157232.1| PREDICTED: LOW QUALITY PROTEIN: probable pro...    58   7e-07
ref|XP_004135583.1| PREDICTED: probable protein phosphatase 2C 5...    58   7e-07
ref|XP_002318970.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07
ref|XP_002282985.1| PREDICTED: probable protein phosphatase 2C 5...    57   2e-06

>ref|XP_002330236.1| predicted protein [Populus trichocarpa] gi|222871692|gb|EEF08823.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/42 (73%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MTETEVNR--PPLVPLATLIGRELRIAKIEKPSIKYGQAGLA 3
           M++ EV+R  PPLVPLATLIGRELR  KIEKP +KYGQA LA
Sbjct: 1   MSQDEVSRMRPPLVPLATLIGRELRNEKIEKPYVKYGQAALA 42


>ref|XP_004157232.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C
           5-like [Cucumis sativus]
          Length = 428

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MTETEVNR--PPLVPLATLIGRELRIAKIEKPSIKYGQAGLA 3
           M++TEV+R   PLVPLATLIGRELR  K+EKP +KYGQA LA
Sbjct: 1   MSQTEVSRIKTPLVPLATLIGRELRNEKVEKPFVKYGQAALA 42


>ref|XP_004135583.1| PREDICTED: probable protein phosphatase 2C 5-like [Cucumis sativus]
          Length = 428

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MTETEVNR--PPLVPLATLIGRELRIAKIEKPSIKYGQAGLA 3
           M++TEV+R   PLVPLATLIGRELR  K+EKP +KYGQA LA
Sbjct: 1   MSQTEVSRIKTPLVPLATLIGRELRNEKVEKPFVKYGQAALA 42


>ref|XP_002318970.1| predicted protein [Populus trichocarpa] gi|222857346|gb|EEE94893.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 28/33 (84%), Positives = 29/33 (87%)
 Frame = -1

Query: 101 RPPLVPLATLIGRELRIAKIEKPSIKYGQAGLA 3
           RPPLVPLATLIGRELR  KIEKP +KYGQA LA
Sbjct: 19  RPPLVPLATLIGRELRNEKIEKPFVKYGQAALA 51


>ref|XP_002282985.1| PREDICTED: probable protein phosphatase 2C 5 [Vitis vinifera]
           gi|296089741|emb|CBI39560.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/42 (73%), Positives = 34/42 (80%), Gaps = 2/42 (4%)
 Frame = -1

Query: 122 MTETEVNR--PPLVPLATLIGRELRIAKIEKPSIKYGQAGLA 3
           M+ETEV+R    LVPLATLIGRELR  K+EKP IKYGQA LA
Sbjct: 1   MSETEVSRMKSSLVPLATLIGRELRNEKVEKPYIKYGQAALA 42


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