BLASTX nr result

ID: Coptis23_contig00030002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00030002
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284399.1| PREDICTED: DUF246 domain-containing protein ...   285   6e-75
emb|CBI19065.3| unnamed protein product [Vitis vinifera]              283   2e-74
ref|XP_003614789.1| Growth regulator-related protein [Medicago t...   270   2e-70
ref|XP_002513766.1| conserved hypothetical protein [Ricinus comm...   268   7e-70
ref|XP_003544150.1| PREDICTED: DUF246 domain-containing protein ...   266   2e-69

>ref|XP_002284399.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 585

 Score =  285 bits (728), Expect = 6e-75
 Identities = 138/206 (66%), Positives = 169/206 (82%), Gaps = 5/206 (2%)
 Frame = -3

Query: 603 CLGAFFPIMNPSPLPGSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCAN 424
           C+G F  ++  +PLPGSVYRS E+F+KLW +I+SDN+SA+E+SSVWRYNRRL EQ+PC N
Sbjct: 82  CVGPFSGLVWQAPLPGSVYRSHEIFEKLWHEIESDNSSAIELSSVWRYNRRLKEQKPCPN 141

Query: 423 TTGKHSGFS-----EPSGYLIVEANGGLNQQRSSICNAVAVAWLLNAILVIPQLTFHNIW 259
           T+ +H   +     +PSGYLIVEANGGLNQQRSSICNAVAVA LLNAILVIP L FH++W
Sbjct: 142 TSYRHHFATKRESPDPSGYLIVEANGGLNQQRSSICNAVAVAGLLNAILVIPHLDFHSVW 201

Query: 258 KDPSGFRDIYDENHFISTLEGYVTVVKNLPEDLIGRYSYNMSNILNVDIRGWAPASYYLR 79
            DPS F DIYDE+HFI+TL+G+V VV+ LPE ++ RY YN++NI N+ I  WAP SYYL 
Sbjct: 202 VDPSEFGDIYDEDHFITTLKGFVEVVQELPEVVMERYDYNITNIPNIRIEAWAPVSYYLE 261

Query: 78  EVRPILQEQGVIRIAPFANRLAMEVP 1
           EV P+L++QGVIRIAPFANRLAM VP
Sbjct: 262 EVYPVLRKQGVIRIAPFANRLAMNVP 287


>emb|CBI19065.3| unnamed protein product [Vitis vinifera]
          Length = 585

 Score =  283 bits (723), Expect = 2e-74
 Identities = 137/206 (66%), Positives = 168/206 (81%), Gaps = 5/206 (2%)
 Frame = -3

Query: 603 CLGAFFPIMNPSPLPGSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCAN 424
           C+G F  ++  +PLPGSVYRS E+F+KLW +I+SDN+SA+E+SSVWRYNRRL EQ+PC N
Sbjct: 82  CVGPFSGLVWQAPLPGSVYRSHEIFEKLWHEIESDNSSAIELSSVWRYNRRLKEQKPCPN 141

Query: 423 TTGKHSGFS-----EPSGYLIVEANGGLNQQRSSICNAVAVAWLLNAILVIPQLTFHNIW 259
           T+ +H   +     +PSGYLIVEANGGLNQQRSSICNAVAVA LLNAILVIP L FH++W
Sbjct: 142 TSYRHHFATKRESPDPSGYLIVEANGGLNQQRSSICNAVAVAGLLNAILVIPHLDFHSVW 201

Query: 258 KDPSGFRDIYDENHFISTLEGYVTVVKNLPEDLIGRYSYNMSNILNVDIRGWAPASYYLR 79
            DP  F DIYDE+HFI+TL+G+V VV+ LPE ++ RY YN++NI N+ I  WAP SYYL 
Sbjct: 202 VDPRQFGDIYDEDHFITTLKGFVEVVQELPEVVMERYDYNITNIPNIRIEAWAPVSYYLE 261

Query: 78  EVRPILQEQGVIRIAPFANRLAMEVP 1
           EV P+L++QGVIRIAPFANRLAM VP
Sbjct: 262 EVYPVLRKQGVIRIAPFANRLAMNVP 287


>ref|XP_003614789.1| Growth regulator-related protein [Medicago truncatula]
           gi|355516124|gb|AES97747.1| Growth regulator-related
           protein [Medicago truncatula]
          Length = 589

 Score =  270 bits (689), Expect = 2e-70
 Identities = 135/207 (65%), Positives = 163/207 (78%), Gaps = 6/207 (2%)
 Frame = -3

Query: 603 CLGAFFPI---MNPSPLPGSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQP 433
           C+G F P    +  +PLPGS YRS EVFD LWP+I SDN+S +E+SSVW+Y R+L E++P
Sbjct: 82  CVGPF-PFTFFIGHTPLPGSRYRSHEVFDHLWPEIDSDNSSFIELSSVWKYKRKLREKKP 140

Query: 432 CANTTG-KHSGFSEP--SGYLIVEANGGLNQQRSSICNAVAVAWLLNAILVIPQLTFHNI 262
           C+N T   H  F  P  +G+LIVEANGGLNQQRS+ICNAVAVA LLNAILVIP   FHN+
Sbjct: 141 CSNLTDLHHEHFVSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPHFEFHNV 200

Query: 261 WKDPSGFRDIYDENHFISTLEGYVTVVKNLPEDLIGRYSYNMSNILNVDIRGWAPASYYL 82
           WKDPS F DIYDE+HFISTL+GYV VVK LPE ++ R++YNM+NI ++ +  WAP SYYL
Sbjct: 201 WKDPSEFGDIYDEDHFISTLDGYVKVVKELPEAIMERHNYNMTNITSIRVEAWAPVSYYL 260

Query: 81  REVRPILQEQGVIRIAPFANRLAMEVP 1
             V PILQ++GVIRIAPFANRLAM VP
Sbjct: 261 GVVHPILQKEGVIRIAPFANRLAMSVP 287


>ref|XP_002513766.1| conserved hypothetical protein [Ricinus communis]
           gi|223546852|gb|EEF48349.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 591

 Score =  268 bits (684), Expect = 7e-70
 Identities = 127/206 (61%), Positives = 167/206 (81%), Gaps = 5/206 (2%)
 Frame = -3

Query: 603 CLGAFFPIMNPSPLPGSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCAN 424
           C+G F  ++ PS LPG+VYRS ++F KLWP I +DN++++E+SSVW++ RR   Q+PC N
Sbjct: 91  CVGPFSALLQPS-LPGAVYRSHDLFLKLWPHISADNSTSIELSSVWKFKRRSKLQRPCPN 149

Query: 423 TTGKHSGFSE-----PSGYLIVEANGGLNQQRSSICNAVAVAWLLNAILVIPQLTFHNIW 259
           +T + S  +      PSGYLIVEANGGLNQQRS+ICNAVA+A LLNA+LVIPQ  F+++W
Sbjct: 150 STARQSLAANEVSTGPSGYLIVEANGGLNQQRSAICNAVALAGLLNAVLVIPQFEFNSVW 209

Query: 258 KDPSGFRDIYDENHFISTLEGYVTVVKNLPEDLIGRYSYNMSNILNVDIRGWAPASYYLR 79
           +DPS F DIYD++HFI+TLEGYV VVK LP+++I RY YN++NIL++ ++ WAPA+YY+ 
Sbjct: 210 RDPSEFGDIYDQDHFIATLEGYVKVVKELPDEVIQRYDYNITNILSIRVQAWAPANYYMG 269

Query: 78  EVRPILQEQGVIRIAPFANRLAMEVP 1
            V P+LQEQGVIRIAPFANRLAM VP
Sbjct: 270 AVYPVLQEQGVIRIAPFANRLAMSVP 295


>ref|XP_003544150.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 592

 Score =  266 bits (681), Expect = 2e-69
 Identities = 133/212 (62%), Positives = 161/212 (75%), Gaps = 11/212 (5%)
 Frame = -3

Query: 603 CLGAFFPIMNPSPLPGSVYRSPEVFDKLWPQIQSDNASALEMSSVWRYNRRLLEQQPCAN 424
           C+G F  ++  + LPGS YRS E+F  LW  I+ DN+SA E++SVW+Y R+L EQ+PC N
Sbjct: 85  CVGPFSALIGHTLLPGSRYRSHEIFHNLWHDIEGDNSSATELASVWKYKRKLREQKPCPN 144

Query: 423 TTGKH-SGFSEP----------SGYLIVEANGGLNQQRSSICNAVAVAWLLNAILVIPQL 277
            T  H   F +           +G+LIVEANGGLNQQRS+ICNAVAVA LLNAILVIPQL
Sbjct: 145 LTALHREHFGKRLDTLPMSPGLNGFLIVEANGGLNQQRSAICNAVAVAGLLNAILVIPQL 204

Query: 276 TFHNIWKDPSGFRDIYDENHFISTLEGYVTVVKNLPEDLIGRYSYNMSNILNVDIRGWAP 97
            FHN+WKDPS F DIYDE+HFISTL+GYV VVK LPE L+ R++YNM+NI N+ ++ WAP
Sbjct: 205 EFHNVWKDPSEFGDIYDEDHFISTLDGYVKVVKELPEALMERHNYNMTNITNIRVQAWAP 264

Query: 96  ASYYLREVRPILQEQGVIRIAPFANRLAMEVP 1
            SYYL  V PILQ++GVIRIAPFANRLAM VP
Sbjct: 265 VSYYLGVVSPILQKEGVIRIAPFANRLAMSVP 296


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