BLASTX nr result
ID: Coptis23_contig00029991
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029991 (579 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI28136.3| unnamed protein product [Vitis vinifera] 219 2e-55 ref|XP_002529346.1| conserved hypothetical protein [Ricinus comm... 208 6e-52 ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|2... 206 3e-51 ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807... 200 1e-49 emb|CAN83719.1| hypothetical protein VITISV_017077 [Vitis vinifera] 199 3e-49 >emb|CBI28136.3| unnamed protein product [Vitis vinifera] Length = 398 Score = 219 bits (559), Expect = 2e-55 Identities = 115/174 (66%), Positives = 123/174 (70%), Gaps = 2/174 (1%) Frame = -2 Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVV--LGSIWVPPEYXXXX 405 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QA G APQLVV LG IWVPPEY Sbjct: 227 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQATGAAAPQLVVVGLGGIWVPPEYATAA 286 Query: 404 XXXXXGPTIYGAHPASLASTHYCAPPVPQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQ 225 T+YGAHP S S HYC PPVPQDFY P+ YK S Q Sbjct: 287 HTGGT--TLYGAHPPSHTSPHYCGPPVPQDFYAAPAQPHHHSLHHQLHM-----YKASPQ 339 Query: 224 THGSSESDTRGAGDRSESIEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSN 63 T S +SD RGAGDRSESIEDGKSES SWKG+SGENGGER+GL +LRD+GE+SN Sbjct: 340 TQSSPDSDMRGAGDRSESIEDGKSESSSWKGESGENGGERKGLVTLRDDGEESN 393 >ref|XP_002529346.1| conserved hypothetical protein [Ricinus communis] gi|223531166|gb|EEF33013.1| conserved hypothetical protein [Ricinus communis] Length = 474 Score = 208 bits (529), Expect = 6e-52 Identities = 116/194 (59%), Positives = 128/194 (65%), Gaps = 14/194 (7%) Frame = -2 Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXX 399 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QA G PQLVVLG IWVPPEY Sbjct: 283 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAPGAPTPQLVVLGGIWVPPEY--ATAA 340 Query: 398 XXXGPTIYGA--HPASLA-STHYC-APPVPQDFYPGPSXXXXXXXXXXXXXXXXHAY--- 240 PT+YG HP S A H+C APPVPQDFY + H + Sbjct: 341 HGGTPTLYGTHHHPVSHAPPPHFCAAPPVPQDFYTAAAAAGATTPPLPPPHHQLHHHTLH 400 Query: 239 -------KVSSQTHGSSESDTRGAGDRSESIEDGKSESGSWKGDSGENGGERRGLASLRD 81 K +SQ H S ESD RG GDRSESIEDGKSES SWK +SGENGGER+GLA+ R+ Sbjct: 401 HQLHMYNKATSQAHSSPESDIRGTGDRSESIEDGKSESSSWKAESGENGGERKGLAAFRE 460 Query: 80 EGEKSNDNEITLNF 39 +GE+SN +EITL F Sbjct: 461 DGEESNGSEITLKF 474 >ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|222866391|gb|EEF03522.1| predicted protein [Populus trichocarpa] Length = 463 Score = 206 bits (523), Expect = 3e-51 Identities = 117/184 (63%), Positives = 128/184 (69%), Gaps = 4/184 (2%) Frame = -2 Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVVLGSIWVPPEY-XXXXX 402 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QA G PQLVVLG IWVPPEY Sbjct: 281 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGAPPPQLVVLGGIWVPPEYATAAAA 340 Query: 401 XXXXGPTIYGAHPASLA-STHYC-APPVPQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSS 228 GPT+YGAH AS A H+C APPV QDFY + H YK ++ Sbjct: 341 AHSGGPTLYGAHQASHAPPPHFCAAPPVSQDFYTA-AATPPPPLHHHTLYHQLHLYKPTA 399 Query: 227 QTHGSSESDTRGAGDRSESIEDGKSESGSWKGDSGEN-GGERRGLASLRDEGEKSNDNEI 51 Q H S ESD RG RSESIEDGKSES SWKG+SGEN GGERRGLA+LR++ E+SN +EI Sbjct: 400 QAHSSPESDVRGTRGRSESIEDGKSESSSWKGESGENDGGERRGLAALREDCEESNGSEI 459 Query: 50 TLNF 39 TL F Sbjct: 460 TLKF 463 >ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807925 [Glycine max] Length = 454 Score = 200 bits (509), Expect = 1e-49 Identities = 114/184 (61%), Positives = 123/184 (66%), Gaps = 4/184 (2%) Frame = -2 Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXX 399 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QAG APQLVVLG IWVPPEY Sbjct: 280 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAGAA-APQLVVLGGIWVPPEYATAAHT 338 Query: 398 XXXGPTIYGAHPASLAST-HYCAP-PVPQDFYPG--PSXXXXXXXXXXXXXXXXHAYKVS 231 PT+YGAHP S A HYCA P+PQDFY P H YK + Sbjct: 339 AT--PTLYGAHPTSHAPPPHYCAATPMPQDFYTAAPPQPLLPPPPQHHNALHHLHMYKAA 396 Query: 230 SQTHGSSESDTRGAGDRSESIEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSNDNEI 51 S HGS ESD G G+RSESIEDGKSES SWKG+SGEN GER+G+ GE+SN +EI Sbjct: 397 SHGHGSPESDVPGGGERSESIEDGKSESSSWKGESGENEGERKGI------GEESNGSEI 450 Query: 50 TLNF 39 TL F Sbjct: 451 TLKF 454 >emb|CAN83719.1| hypothetical protein VITISV_017077 [Vitis vinifera] Length = 444 Score = 199 bits (506), Expect = 3e-49 Identities = 116/216 (53%), Positives = 124/216 (57%), Gaps = 44/216 (20%) Frame = -2 Query: 578 RELMKVDGLTNDEVKSHLQ----------------------------------------- 522 RELMKVDGLTNDEVKSHLQ Sbjct: 223 RELMKVDGLTNDEVKSHLQVKSLSSSLVFFYFFDPHIKCVDMRETWQRLRTGLKLTKLWV 282 Query: 521 -KYRLHTRRPSPSHQAGGTQAPQLVV--LGSIWVPPEYXXXXXXXXXGPTIYGAHPASLA 351 KYRLHTRRPSPS QA G APQLVV LG IWVPPEY T+YGAHP S Sbjct: 283 RKYRLHTRRPSPSPQATGAAAPQLVVVGLGGIWVPPEYATAAHTGGX--TLYGAHPPSHT 340 Query: 350 STHYCAPPVPQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQTHGSSESDTRGAGDRSES 171 S HYC PPVPQDFY P+ YK S QT S +SD RGAGDRSES Sbjct: 341 SPHYCGPPVPQDFYAAPAQPHHHSLHHQLHM-----YKASPQTQSSPDSDMRGAGDRSES 395 Query: 170 IEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSN 63 IEDGKSES SWKG+SGENGGER+GL +LRD+GE+SN Sbjct: 396 IEDGKSESSSWKGESGENGGERKGLVTLRDDGEESN 431