BLASTX nr result

ID: Coptis23_contig00029991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029991
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28136.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_002529346.1| conserved hypothetical protein [Ricinus comm...   208   6e-52
ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807...   200   1e-49
emb|CAN83719.1| hypothetical protein VITISV_017077 [Vitis vinifera]   199   3e-49

>emb|CBI28136.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  219 bits (559), Expect = 2e-55
 Identities = 115/174 (66%), Positives = 123/174 (70%), Gaps = 2/174 (1%)
 Frame = -2

Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVV--LGSIWVPPEYXXXX 405
           RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QA G  APQLVV  LG IWVPPEY    
Sbjct: 227 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQATGAAAPQLVVVGLGGIWVPPEYATAA 286

Query: 404 XXXXXGPTIYGAHPASLASTHYCAPPVPQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQ 225
                  T+YGAHP S  S HYC PPVPQDFY  P+                  YK S Q
Sbjct: 287 HTGGT--TLYGAHPPSHTSPHYCGPPVPQDFYAAPAQPHHHSLHHQLHM-----YKASPQ 339

Query: 224 THGSSESDTRGAGDRSESIEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSN 63
           T  S +SD RGAGDRSESIEDGKSES SWKG+SGENGGER+GL +LRD+GE+SN
Sbjct: 340 TQSSPDSDMRGAGDRSESIEDGKSESSSWKGESGENGGERKGLVTLRDDGEESN 393


>ref|XP_002529346.1| conserved hypothetical protein [Ricinus communis]
           gi|223531166|gb|EEF33013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score =  208 bits (529), Expect = 6e-52
 Identities = 116/194 (59%), Positives = 128/194 (65%), Gaps = 14/194 (7%)
 Frame = -2

Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXX 399
           RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QA G   PQLVVLG IWVPPEY      
Sbjct: 283 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAPGAPTPQLVVLGGIWVPPEY--ATAA 340

Query: 398 XXXGPTIYGA--HPASLA-STHYC-APPVPQDFYPGPSXXXXXXXXXXXXXXXXHAY--- 240
               PT+YG   HP S A   H+C APPVPQDFY   +                H +   
Sbjct: 341 HGGTPTLYGTHHHPVSHAPPPHFCAAPPVPQDFYTAAAAAGATTPPLPPPHHQLHHHTLH 400

Query: 239 -------KVSSQTHGSSESDTRGAGDRSESIEDGKSESGSWKGDSGENGGERRGLASLRD 81
                  K +SQ H S ESD RG GDRSESIEDGKSES SWK +SGENGGER+GLA+ R+
Sbjct: 401 HQLHMYNKATSQAHSSPESDIRGTGDRSESIEDGKSESSSWKAESGENGGERKGLAAFRE 460

Query: 80  EGEKSNDNEITLNF 39
           +GE+SN +EITL F
Sbjct: 461 DGEESNGSEITLKF 474


>ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|222866391|gb|EEF03522.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  206 bits (523), Expect = 3e-51
 Identities = 117/184 (63%), Positives = 128/184 (69%), Gaps = 4/184 (2%)
 Frame = -2

Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVVLGSIWVPPEY-XXXXX 402
           RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QA G   PQLVVLG IWVPPEY      
Sbjct: 281 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAAGAPPPQLVVLGGIWVPPEYATAAAA 340

Query: 401 XXXXGPTIYGAHPASLA-STHYC-APPVPQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSS 228
               GPT+YGAH AS A   H+C APPV QDFY   +                H YK ++
Sbjct: 341 AHSGGPTLYGAHQASHAPPPHFCAAPPVSQDFYTA-AATPPPPLHHHTLYHQLHLYKPTA 399

Query: 227 QTHGSSESDTRGAGDRSESIEDGKSESGSWKGDSGEN-GGERRGLASLRDEGEKSNDNEI 51
           Q H S ESD RG   RSESIEDGKSES SWKG+SGEN GGERRGLA+LR++ E+SN +EI
Sbjct: 400 QAHSSPESDVRGTRGRSESIEDGKSESSSWKGESGENDGGERRGLAALREDCEESNGSEI 459

Query: 50  TLNF 39
           TL F
Sbjct: 460 TLKF 463


>ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807925 [Glycine max]
          Length = 454

 Score =  200 bits (509), Expect = 1e-49
 Identities = 114/184 (61%), Positives = 123/184 (66%), Gaps = 4/184 (2%)
 Frame = -2

Query: 578 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXX 399
           RELMKVDGLTNDEVKSHLQKYRLHTRRPSPS QAG   APQLVVLG IWVPPEY      
Sbjct: 280 RELMKVDGLTNDEVKSHLQKYRLHTRRPSPSPQAGAA-APQLVVLGGIWVPPEYATAAHT 338

Query: 398 XXXGPTIYGAHPASLAST-HYCAP-PVPQDFYPG--PSXXXXXXXXXXXXXXXXHAYKVS 231
               PT+YGAHP S A   HYCA  P+PQDFY    P                 H YK +
Sbjct: 339 AT--PTLYGAHPTSHAPPPHYCAATPMPQDFYTAAPPQPLLPPPPQHHNALHHLHMYKAA 396

Query: 230 SQTHGSSESDTRGAGDRSESIEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSNDNEI 51
           S  HGS ESD  G G+RSESIEDGKSES SWKG+SGEN GER+G+      GE+SN +EI
Sbjct: 397 SHGHGSPESDVPGGGERSESIEDGKSESSSWKGESGENEGERKGI------GEESNGSEI 450

Query: 50  TLNF 39
           TL F
Sbjct: 451 TLKF 454


>emb|CAN83719.1| hypothetical protein VITISV_017077 [Vitis vinifera]
          Length = 444

 Score =  199 bits (506), Expect = 3e-49
 Identities = 116/216 (53%), Positives = 124/216 (57%), Gaps = 44/216 (20%)
 Frame = -2

Query: 578 RELMKVDGLTNDEVKSHLQ----------------------------------------- 522
           RELMKVDGLTNDEVKSHLQ                                         
Sbjct: 223 RELMKVDGLTNDEVKSHLQVKSLSSSLVFFYFFDPHIKCVDMRETWQRLRTGLKLTKLWV 282

Query: 521 -KYRLHTRRPSPSHQAGGTQAPQLVV--LGSIWVPPEYXXXXXXXXXGPTIYGAHPASLA 351
            KYRLHTRRPSPS QA G  APQLVV  LG IWVPPEY           T+YGAHP S  
Sbjct: 283 RKYRLHTRRPSPSPQATGAAAPQLVVVGLGGIWVPPEYATAAHTGGX--TLYGAHPPSHT 340

Query: 350 STHYCAPPVPQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQTHGSSESDTRGAGDRSES 171
           S HYC PPVPQDFY  P+                  YK S QT  S +SD RGAGDRSES
Sbjct: 341 SPHYCGPPVPQDFYAAPAQPHHHSLHHQLHM-----YKASPQTQSSPDSDMRGAGDRSES 395

Query: 170 IEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSN 63
           IEDGKSES SWKG+SGENGGER+GL +LRD+GE+SN
Sbjct: 396 IEDGKSESSSWKGESGENGGERKGLVTLRDDGEESN 431


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