BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029983
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28363.3| unnamed protein product [Vitis vinifera]              157   6e-37
ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
ref|XP_001775099.1| predicted protein [Physcomitrella patens sub...    98   6e-19
gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]         96   4e-18
ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18

>emb|CBI28363.3| unnamed protein product [Vitis vinifera]
          Length = 930

 Score =  157 bits (398), Expect = 6e-37
 Identities = 84/148 (56%), Positives = 106/148 (71%)
 Frame = +1

Query: 10  LQTNRITTHDFKKLKRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERT 189
           LQ+N I      KLK I   E HART+     FNLYL++Y + G M+EA+ LFDEMPER+
Sbjct: 29  LQSNHIAQ---TKLKPIPQNEIHARTR----LFNLYLRMYVNAGAMQEARKLFDEMPERS 81

Query: 190 LISWTVLMSGYTRHGYADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGR 369
           L+SWT++MSGY RHG A E L +F +M+   G   L+PDSFV+A+VLRAC +V+ LSYGR
Sbjct: 82  LVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRPDSFVFAVVLRACGMVECLSYGR 141

Query: 370 ELHCRVLKIDGVVDSYVENALVSMYASC 453
            +H  V+K   VVDS+VENALVSMY SC
Sbjct: 142 GVHGLVVKQSSVVDSFVENALVSMYGSC 169



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/115 (30%), Positives = 69/115 (60%)
 Frame = +1

Query: 109 NLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFQNMVECHGN 288
           N  + +Y S G + +A  +F  + +  L+ W+ ++SGY ++G  +E L +F +MV    +
Sbjct: 160 NALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV----S 215

Query: 289 VSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSMYASC 453
             ++PD+F +++VL AC+ ++   +G + HC ++K+      Y+EN+L+  YA C
Sbjct: 216 GGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKC 270



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/121 (30%), Positives = 64/121 (52%)
 Frame = +1

Query: 91  STILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFQNM 270
           S +   N  +  YA  G +   + +F  M E+ L+SW   ++GY  + +  E L +FQ +
Sbjct: 255 SCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQIL 314

Query: 271 VECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSMYAS 450
           +E    VS Q D F    +L+A S + +L +G+E+H  +L+     + YV ++L+ MY  
Sbjct: 315 ME---EVS-QCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIG 370

Query: 451 C 453
           C
Sbjct: 371 C 371


>ref|XP_002269762.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 906

 Score =  135 bits (340), Expect = 3e-30
 Identities = 66/110 (60%), Positives = 85/110 (77%)
 Frame = +1

Query: 124 IYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFQNMVECHGNVSLQP 303
           +Y + G M+EA+ LFDEMPER+L+SWT++MSGY RHG A E L +F +M+   G   L+P
Sbjct: 1   MYVNAGAMQEARKLFDEMPERSLVSWTIVMSGYARHGPASEVLMMFWDMLCGSGGGLLRP 60

Query: 304 DSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSMYASC 453
           DSFV+A+VLRAC +V+ LSYGR +H  V+K   VVDS+VENALVSMY SC
Sbjct: 61  DSFVFAVVLRACGMVECLSYGRGVHGLVVKQSSVVDSFVENALVSMYGSC 110



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 35/115 (30%), Positives = 69/115 (60%)
 Frame = +1

Query: 109 NLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFQNMVECHGN 288
           N  + +Y S G + +A  +F  + +  L+ W+ ++SGY ++G  +E L +F +MV    +
Sbjct: 101 NALVSMYGSCGALEDAAVVFGGIDKPDLVGWSSILSGYVKNGLEEEGLRIFCDMV----S 156

Query: 289 VSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSMYASC 453
             ++PD+F +++VL AC+ ++   +G + HC ++K+      Y+EN+L+  YA C
Sbjct: 157 GGIEPDAFAFSMVLGACTNLECWDFGTQAHCYIIKMGFDSCLYLENSLMDFYAKC 211



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 37/121 (30%), Positives = 64/121 (52%)
 Frame = +1

Query: 91  STILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFQNM 270
           S +   N  +  YA  G +   + +F  M E+ L+SW   ++GY  + +  E L +FQ +
Sbjct: 196 SCLYLENSLMDFYAKCGDLEGMRRVFSHMSEKNLVSWNTFINGYVHNFHYLEALRIFQIL 255

Query: 271 VECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSYVENALVSMYAS 450
           +E    VS Q D F    +L+A S + +L +G+E+H  +L+     + YV ++L+ MY  
Sbjct: 256 ME---EVS-QCDDFSLLSILKAVSGLGHLDHGKEIHGYILRAGIETNRYVVSSLLDMYIG 311

Query: 451 C 453
           C
Sbjct: 312 C 312



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/132 (25%), Positives = 68/132 (51%)
 Frame = +1

Query: 52  KRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRH 231
           K  H+       KS     +  + +Y+  G+   A+ +F  + +     W+ L+SG++ +
Sbjct: 359 KMFHSLIIKLDLKSDSYVLSSLIDMYSKCGIWEAAKRVFTRVEQPDTAPWSALISGHSWN 418

Query: 232 GYADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVD 411
           G   E L +F+ M +  G   ++ + F +  V+ AC  ++NL  G+ELHC++L+     +
Sbjct: 419 GCFAEALKLFRKM-QFDG---IKANEFTFTSVILACLALENLRKGKELHCKILRSGYESN 474

Query: 412 SYVENALVSMYA 447
             V N L+++Y+
Sbjct: 475 FSVVNTLINLYS 486


>ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162673550|gb|EDQ60071.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 804

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/134 (36%), Positives = 75/134 (55%)
 Frame = +1

Query: 52  KRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRH 231
           K++H        K  +   N  L++YA  G + EA+ LFD+   ++++SW V++SGY   
Sbjct: 48  KQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHR 107

Query: 232 GYADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVD 411
           G A E   +F  M +      L+PD F +  +L ACS    L++GRE+H RV++     D
Sbjct: 108 GLAQEAFNLFTLMQQ----ERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLAND 163

Query: 412 SYVENALVSMYASC 453
           + V NAL+SMYA C
Sbjct: 164 TTVGNALISMYAKC 177



 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/134 (34%), Positives = 72/134 (53%)
 Frame = +1

Query: 52  KRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRH 231
           K IHAR       S + F N  + +Y+  G M++A+ +FD MP+R ++SWT L+  Y   
Sbjct: 351 KEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADC 410

Query: 232 GYADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVD 411
               E+   F+ M++      ++ +   Y  VL+ACS    L +G+E+H  V+K   + D
Sbjct: 411 DQVVESFTTFKQMLQ----QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLAD 466

Query: 412 SYVENALVSMYASC 453
             V NAL+SMY  C
Sbjct: 467 LAVTNALMSMYFKC 480



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/134 (29%), Positives = 64/134 (47%)
 Frame = +1

Query: 52  KRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRH 231
           + IH R   A   +     N  + +YA  G +R+A+ +FD M  R  +SWT L   Y   
Sbjct: 149 REIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAES 208

Query: 232 GYADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVD 411
           GY +E+L  +  M++      ++P    Y  VL AC  +  L  G+++H  +++ +   D
Sbjct: 209 GYGEESLKTYHAMLQ----ERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSD 264

Query: 412 SYVENALVSMYASC 453
             V  AL  MY  C
Sbjct: 265 VRVSTALTKMYMKC 278



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/135 (29%), Positives = 67/135 (49%)
 Frame = +1

Query: 43  KKLKRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGY 222
           +K K+IHA    +   S +       ++Y   G  ++A+ +F+ +  R +I+W  ++ G+
Sbjct: 247 EKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGF 306

Query: 223 TRHGYADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDG 402
              G  +E  G F  M+E      + PD   Y  VL AC+    L+ G+E+H R  K   
Sbjct: 307 VDSGQLEEAHGTFHRMLE----EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGL 362

Query: 403 VVDSYVENALVSMYA 447
           V D    NAL++MY+
Sbjct: 363 VSDVRFGNALINMYS 377


>gb|AFW71662.1| hypothetical protein ZEAMMB73_019211 [Zea mays]
          Length = 798

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/115 (44%), Positives = 76/115 (66%), Gaps = 3/115 (2%)
 Frame = +1

Query: 118 LQIYASVGLMREAQTLFDEMPER--TLISWTVLMSGYTRHGYADETLGVFQNMVECHGNV 291
           L+ +A  G M+ A+ +FD MP+R  +L++WT LMSGY  HG A E L     ++ C   +
Sbjct: 54  LRAHARAGRMQPAREVFDAMPDRGRSLVAWTTLMSGYATHGPASEAL----ELLLCMLGL 109

Query: 292 SLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGV-VDSYVENALVSMYASC 453
            ++PD+FV+++ LRAC+ V +L  GR+LH  V K+  V VD +V N LV+MY+SC
Sbjct: 110 LVRPDAFVFSVALRACAAVGSLRLGRQLHGAVAKLGYVGVDLFVANGLVTMYSSC 164



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/114 (29%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
 Frame = +1

Query: 109 NLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGYADETLGVFQNMVECHGN 288
           N  + +Y+S   +  A+ +F  +    L+SWT ++S YT +G   E L +F  M    G 
Sbjct: 155 NGLVTMYSSCQSLPCAEKVFGSIASPDLVSWTSMLSAYTENGRDAEALVLFMEM--ARGG 212

Query: 289 VSLQPDSFVYAIVLRACSVVKN--LSYGRELHCRVLKIDGVVDSYVENALVSMY 444
           V+   D+F  ++ LRA S + +  +  G +LHC ++K+  V   +++N L+  Y
Sbjct: 213 VAC--DAFTLSVALRAASSLGHVGVGLGHQLHCCMIKMGLVGKEFLDNCLIGFY 264


>ref|XP_002309013.1| predicted protein [Populus trichocarpa] gi|222854989|gb|EEE92536.1|
           predicted protein [Populus trichocarpa]
          Length = 583

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 48/132 (36%), Positives = 77/132 (58%)
 Frame = +1

Query: 58  IHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMSGYTRHGY 237
           +HA      T+S ++  N  L +YA    +REA+ +FDEM ER L+SW+ ++SGY + G 
Sbjct: 25  LHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSERNLVSWSAMISGYEQIGE 84

Query: 238 ADETLGVFQNMVECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLKIDGVVDSY 417
               LG+F  +       ++ P+ +VYA V+ AC+ +K L  G+++H + LK      S+
Sbjct: 85  PISALGLFSKL-------NIVPNEYVYASVISACASLKGLVQGKQIHGQALKFGLDSVSF 137

Query: 418 VENALVSMYASC 453
           V NAL++MY  C
Sbjct: 138 VSNALITMYMKC 149



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/140 (29%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
 Frame = +1

Query: 37  DFKKLKRIHARETHARTKSTILFFNLYLQIYASVGLMREAQTLFDEMPERTLISWTVLMS 216
           D K+ + +H +    +  ST    NL + +Y+ + L+ EA+  F  + E+ LISW   +S
Sbjct: 217 DLKRGELLHCQTIKLKLNSTAFIGNLIITMYSKLNLLEEAEKAFRSIEEKDLISWNTFIS 276

Query: 217 GYTRHGYADETLGVFQNMV-ECHGNVSLQPDSFVYAIVLRACSVVKNLSYGRELHCRVLK 393
             +     ++ L  F+ M+ EC     ++PD F +A  L ACS + ++  G+++H  +++
Sbjct: 277 SCSHCNDHEKALEAFKEMLNECR----VRPDEFTFASALAACSGLASMCNGKQIHGHLIR 332

Query: 394 IDGVVDSYVENALVSMYASC 453
                D    NAL++MYA C
Sbjct: 333 TRLYQDVGAGNALINMYAKC 352