BLASTX nr result

ID: Coptis23_contig00029975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029975
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17843.3| unnamed protein product [Vitis vinifera]              196   3e-48
ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE...   196   3e-48
ref|XP_002325044.1| predicted protein [Populus trichocarpa] gi|2...   188   5e-46
ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|2...   180   1e-43
gb|AEZ06404.1| VIN3B-like protein [Aquilegia coerulea]                178   5e-43

>emb|CBI17843.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  196 bits (497), Expect = 3e-48
 Identities = 96/189 (50%), Positives = 136/189 (71%)
 Frame = -1

Query: 575 PYERDSCGMSCHVECALRHERAGSAENSQHGKLDGSFCCVSCGKLNDLHRCLRKQLLIAK 396
           P++  SCGMSCH+ECA +HE++G A++ +H +LDGSF CVSCGK+ND+  C RKQL++AK
Sbjct: 155 PFQGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAK 214

Query: 395 DTRQMEVLFHRLSLSQTLLRGTQKYQKVHEIVSEAVRKLEAEVGPLPGLPMKLAEGNVSS 216
           +TR++++L +R+SLSQ LL GT+KYQK++EIV EAV+KLEAEVGPL GLP+K A G V+ 
Sbjct: 215 ETRRVDILCYRVSLSQKLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVKTARGIVNR 274

Query: 215 LSTGPETQKLCASAMKXXXXXXXXXXXXXXSNRETQXXXXXXXXXXXLIRFENVCPSSIT 36
           LS+GPE Q+LCA A++                 + Q            IRFE+VC +S+T
Sbjct: 275 LSSGPEVQRLCALALESLDSVLSNSHPRPAPGPKIQ----DAGLVAPSIRFEDVCSTSLT 330

Query: 35  LVLGFKDTT 9
           ++LG +D++
Sbjct: 331 VILGSEDSS 339


>ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis
           vinifera]
          Length = 738

 Score =  196 bits (497), Expect = 3e-48
 Identities = 96/189 (50%), Positives = 136/189 (71%)
 Frame = -1

Query: 575 PYERDSCGMSCHVECALRHERAGSAENSQHGKLDGSFCCVSCGKLNDLHRCLRKQLLIAK 396
           P++  SCGMSCH+ECA +HE++G A++ +H +LDGSF CVSCGK+ND+  C RKQL++AK
Sbjct: 188 PFQGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQLMMAK 247

Query: 395 DTRQMEVLFHRLSLSQTLLRGTQKYQKVHEIVSEAVRKLEAEVGPLPGLPMKLAEGNVSS 216
           +TR++++L +R+SLSQ LL GT+KYQK++EIV EAV+KLEAEVGPL GLP+K A G V+ 
Sbjct: 248 ETRRVDILCYRVSLSQKLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVKTARGIVNR 307

Query: 215 LSTGPETQKLCASAMKXXXXXXXXXXXXXXSNRETQXXXXXXXXXXXLIRFENVCPSSIT 36
           LS+GPE Q+LCA A++                 + Q            IRFE+VC +S+T
Sbjct: 308 LSSGPEVQRLCALALESLDSVLSNSHPRPAPGPKIQ----DAGLVAPSIRFEDVCSTSLT 363

Query: 35  LVLGFKDTT 9
           ++LG +D++
Sbjct: 364 VILGSEDSS 372


>ref|XP_002325044.1| predicted protein [Populus trichocarpa] gi|222866478|gb|EEF03609.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  188 bits (478), Expect = 5e-46
 Identities = 93/189 (49%), Positives = 131/189 (69%)
 Frame = -1

Query: 575 PYERDSCGMSCHVECALRHERAGSAENSQHGKLDGSFCCVSCGKLNDLHRCLRKQLLIAK 396
           P++  +C MSCH++CAL+HE +G  ++ +HG+LDGSF C +CGK+NDL  C RKQL++AK
Sbjct: 130 PFQGVACCMSCHLDCALKHESSGIGKDGRHGRLDGSFRCFACGKVNDLLGCWRKQLMMAK 189

Query: 395 DTRQMEVLFHRLSLSQTLLRGTQKYQKVHEIVSEAVRKLEAEVGPLPGLPMKLAEGNVSS 216
           DTR++++L +R+SLSQ LL GT+KYQK+HEIV EA +KLEAEVGPL GLP+K+  G V+ 
Sbjct: 190 DTRRVDILCYRVSLSQKLLNGTEKYQKLHEIVDEAAKKLEAEVGPLIGLPVKMGRGIVNR 249

Query: 215 LSTGPETQKLCASAMKXXXXXXXXXXXXXXSNRETQXXXXXXXXXXXLIRFENVCPSSIT 36
           LS+GPE QKLC SA++               N   Q            ++FE+V  +S+ 
Sbjct: 250 LSSGPEVQKLCTSALESLDRMLSNTILHPLPNPNMQ----------VTVKFEDVRATSLA 299

Query: 35  LVLGFKDTT 9
           LVLG +D++
Sbjct: 300 LVLGSEDSS 308


>ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1|
           predicted protein [Populus trichocarpa]
          Length = 679

 Score =  180 bits (457), Expect = 1e-43
 Identities = 91/196 (46%), Positives = 128/196 (65%), Gaps = 7/196 (3%)
 Frame = -1

Query: 575 PYERDSCGMSCHVECALRHERAGSAENSQHGKLDGSFCCVSCGKLNDLHRCLRKQLLIAK 396
           P++  +C MSCH++CAL+ E +G  +N +HG+LDGSFCC SCGK+NDL  C RKQL++AK
Sbjct: 166 PFQGVACSMSCHLDCALKQESSGIGKNGRHGRLDGSFCCFSCGKVNDLLGCWRKQLMMAK 225

Query: 395 DTRQMEVLFHRLSLSQTLLRGTQKYQKVHEIVSEAVRKLEAEVGPLPGLPMKLAEGNVSS 216
           DTR++++L +R+SLSQ LL GT+KYQK+ EIV EA  KLEAEVGPL GLP+K+  G V+ 
Sbjct: 226 DTRRVDILCYRVSLSQKLLNGTEKYQKLLEIVGEAATKLEAEVGPLIGLPVKMGRGIVNR 285

Query: 215 LSTGPETQKLCASAMKXXXXXXXXXXXXXXSNRETQ-------XXXXXXXXXXXLIRFEN 57
           LS+G E QKLC  A++               + + Q                   + FE+
Sbjct: 286 LSSGSEVQKLCTFALESLDKMLSNTISHPLPDPKMQGNHWCSHVSTDSNMIAPITVNFED 345

Query: 56  VCPSSITLVLGFKDTT 9
           V  +S+ LVLG++D++
Sbjct: 346 VHSTSLALVLGYEDSS 361


>gb|AEZ06404.1| VIN3B-like protein [Aquilegia coerulea]
          Length = 732

 Score =  178 bits (452), Expect = 5e-43
 Identities = 93/183 (50%), Positives = 127/183 (69%)
 Frame = -1

Query: 575 PYERDSCGMSCHVECALRHERAGSAENSQHGKLDGSFCCVSCGKLNDLHRCLRKQLLIAK 396
           P+E ++CGMSCH+ECA++HER+G  ++     LDGSF C+ CGK+NDL  C RKQL+ AK
Sbjct: 172 PHEGNACGMSCHLECAIKHERSGILKDEHQKGLDGSFECIYCGKVNDLLSCWRKQLMTAK 231

Query: 395 DTRQMEVLFHRLSLSQTLLRGTQKYQKVHEIVSEAVRKLEAEVGPLPGLPMKLAEGNVSS 216
           DTR+++VL +R+ LSQ LL GT KYQK++EIV  A +KLEAEVGP+ G P+K+A G V+ 
Sbjct: 232 DTRRVDVLCYRVFLSQKLLFGTNKYQKLNEIVETAAKKLEAEVGPIAGSPVKMARGIVNR 291

Query: 215 LSTGPETQKLCASAMKXXXXXXXXXXXXXXSNRETQXXXXXXXXXXXLIRFENVCPSSIT 36
           LS+GP+ QKLCASA++              SN +T+           L+RFENV  +S+T
Sbjct: 292 LSSGPDIQKLCASAVEALDLMISANTQRHLSNTKTR---DSSLVSSALVRFENVNSTSLT 348

Query: 35  LVL 27
           +VL
Sbjct: 349 VVL 351


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