BLASTX nr result

ID: Coptis23_contig00029968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029968
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ88870.1| predicted protein [Hordeum vulgare subsp. vulgare]     56   4e-06
ref|XP_002277442.1| PREDICTED: uncharacterized protein LOC100257...    56   4e-06
ref|XP_003557834.1| PREDICTED: uncharacterized protein LOC100838...    55   5e-06
ref|XP_002315536.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06
ref|XP_002311822.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>dbj|BAJ88870.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 434

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 84 RADYNPKEDLLDQEFMLKGRWFQRRDLE 1
          RADY+P +DLL+QEFMLKGRWFQR+DLE
Sbjct: 13 RADYSPNDDLLEQEFMLKGRWFQRKDLE 40


>ref|XP_002277442.1| PREDICTED: uncharacterized protein LOC100257995 [Vitis vinifera]
          gi|297736965|emb|CBI26166.3| unnamed protein product
          [Vitis vinifera]
          Length = 601

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 84 RADYNPKEDLLDQEFMLKGRWFQRRDLE 1
          RA+Y+PK DLLDQEFMLKG+WFQR+DLE
Sbjct: 13 RAEYDPKNDLLDQEFMLKGKWFQRKDLE 40


>ref|XP_003557834.1| PREDICTED: uncharacterized protein LOC100838212 [Brachypodium
          distachyon]
          Length = 573

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 23/28 (82%), Positives = 27/28 (96%)
 Frame = -3

Query: 84 RADYNPKEDLLDQEFMLKGRWFQRRDLE 1
          RADY+P +DLL+QEFMLKGRWFQR+DLE
Sbjct: 13 RADYSPDDDLLEQEFMLKGRWFQRKDLE 40


>ref|XP_002315536.1| predicted protein [Populus trichocarpa]
          gi|222864576|gb|EEF01707.1| predicted protein [Populus
          trichocarpa]
          Length = 568

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = -3

Query: 84 RADYNPKEDLLDQEFMLKGRWFQRRDLE 1
          RA+YNPK DLLDQEFMLKG+W+QR+D+E
Sbjct: 13 RAEYNPKHDLLDQEFMLKGKWYQRKDVE 40


>ref|XP_002311822.1| predicted protein [Populus trichocarpa]
          gi|222851642|gb|EEE89189.1| predicted protein [Populus
          trichocarpa]
          Length = 536

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 22/28 (78%), Positives = 27/28 (96%)
 Frame = -3

Query: 84 RADYNPKEDLLDQEFMLKGRWFQRRDLE 1
          RA+YNPK DLLDQEFMLKG+W+QR+D+E
Sbjct: 13 RAEYNPKHDLLDQEFMLKGKWYQRKDVE 40


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