BLASTX nr result

ID: Coptis23_contig00029959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029959
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22450.3| unnamed protein product [Vitis vinifera]              142   4e-32
ref|XP_002264556.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi...   142   4e-32
ref|XP_002313180.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
emb|CBI22449.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002264652.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vi...   136   2e-30

>emb|CBI22450.3| unnamed protein product [Vitis vinifera]
          Length = 1130

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = -1

Query: 260 ESGCWSMLKGGLTVDSSGPAELYFESNNTRVEIWADNVSLQPFTKEQWRSHQDQSIEKAR 81
           ESGCWSMLKGGLTVDSSGPAELYFES +T VEIW D++SLQPFT+EQW SHQDQSIEK R
Sbjct: 160 ESGCWSMLKGGLTVDSSGPAELYFESEDTSVEIWVDSISLQPFTQEQWTSHQDQSIEKTR 219

Query: 80  KGKVKIQAVDSQGKILAGAKVSIRQN 3
           K KV++QA D+ G  +AGAK++I+QN
Sbjct: 220 KRKVRLQATDAHGNPIAGAKMAIKQN 245



 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/85 (71%), Positives = 73/85 (85%)
 Frame = -1

Query: 260 ESGCWSMLKGGLTVDSSGPAELYFESNNTRVEIWADNVSLQPFTKEQWRSHQDQSIEKAR 81
           ESGCWSMLKGGLT+ SSGPA+L+FES NT+VEIW D++SLQPF +EQW+SHQDQSIEK R
Sbjct: 694 ESGCWSMLKGGLTMKSSGPADLFFESKNTKVEIWVDSISLQPFIQEQWKSHQDQSIEKTR 753

Query: 80  KGKVKIQAVDSQGKILAGAKVSIRQ 6
           K KV+IQA+D++G  L GA V  RQ
Sbjct: 754 KTKVRIQAIDARGNPLPGATVQARQ 778


>ref|XP_002264556.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera]
          Length = 658

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/86 (75%), Positives = 76/86 (88%)
 Frame = -1

Query: 260 ESGCWSMLKGGLTVDSSGPAELYFESNNTRVEIWADNVSLQPFTKEQWRSHQDQSIEKAR 81
           ESGCWSMLKGGLTVDSSGPAELYFES +T VEIW D++SLQPFT+EQW SHQDQSIEK R
Sbjct: 223 ESGCWSMLKGGLTVDSSGPAELYFESEDTSVEIWVDSISLQPFTQEQWTSHQDQSIEKTR 282

Query: 80  KGKVKIQAVDSQGKILAGAKVSIRQN 3
           K KV++QA D+ G  +AGAK++I+QN
Sbjct: 283 KRKVRLQATDAHGNPIAGAKMAIKQN 308


>ref|XP_002313180.1| predicted protein [Populus trichocarpa] gi|222849588|gb|EEE87135.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  139 bits (349), Expect = 3e-31
 Identities = 63/86 (73%), Positives = 75/86 (87%)
 Frame = -1

Query: 260 ESGCWSMLKGGLTVDSSGPAELYFESNNTRVEIWADNVSLQPFTKEQWRSHQDQSIEKAR 81
           E  CWSMLKGGLTVD+SGPAELYFESNNT VEIW D++SLQPFT+++WRSHQDQSIE+ R
Sbjct: 106 EPKCWSMLKGGLTVDASGPAELYFESNNTSVEIWVDSISLQPFTEKEWRSHQDQSIERTR 165

Query: 80  KGKVKIQAVDSQGKILAGAKVSIRQN 3
           K KV+IQA+D QG  L+ A +SI+QN
Sbjct: 166 KEKVRIQAIDEQGNPLSNATISIKQN 191


>emb|CBI22449.3| unnamed protein product [Vitis vinifera]
          Length = 557

 Score =  136 bits (342), Expect = 2e-30
 Identities = 60/83 (72%), Positives = 75/83 (90%)
 Frame = -1

Query: 260 ESGCWSMLKGGLTVDSSGPAELYFESNNTRVEIWADNVSLQPFTKEQWRSHQDQSIEKAR 81
           E+GCWSMLKGGLTV+ SGPA+LYFESN+T VEIW D+VSLQPFTKE+WR+HQDQS+EK R
Sbjct: 117 ETGCWSMLKGGLTVEGSGPAQLYFESNDTSVEIWVDSVSLQPFTKEEWRTHQDQSVEKTR 176

Query: 80  KGKVKIQAVDSQGKILAGAKVSI 12
           K KV++QAVD +G  +AGAK+++
Sbjct: 177 KTKVRLQAVDGRGNPVAGAKMAV 199


>ref|XP_002264652.1| PREDICTED: endo-1,4-beta-xylanase A-like [Vitis vinifera]
          Length = 583

 Score =  136 bits (342), Expect = 2e-30
 Identities = 60/83 (72%), Positives = 75/83 (90%)
 Frame = -1

Query: 260 ESGCWSMLKGGLTVDSSGPAELYFESNNTRVEIWADNVSLQPFTKEQWRSHQDQSIEKAR 81
           E+GCWSMLKGGLTV+ SGPA+LYFESN+T VEIW D+VSLQPFTKE+WR+HQDQS+EK R
Sbjct: 143 ETGCWSMLKGGLTVEGSGPAQLYFESNDTSVEIWVDSVSLQPFTKEEWRTHQDQSVEKTR 202

Query: 80  KGKVKIQAVDSQGKILAGAKVSI 12
           K KV++QAVD +G  +AGAK+++
Sbjct: 203 KTKVRLQAVDGRGNPVAGAKMAV 225


Top