BLASTX nr result

ID: Coptis23_contig00029954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029954
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633474.1| PREDICTED: wall-associated receptor kinase-l...   182   2e-44
emb|CBI31617.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002282445.1| PREDICTED: wall-associated receptor kinase-l...   182   2e-44
dbj|BAF45465.1| hypothetical protein [Nicotiana tabacum]              169   3e-40
emb|CAN68735.1| hypothetical protein VITISV_037016 [Vitis vinifera]   164   5e-39

>ref|XP_003633474.1| PREDICTED: wall-associated receptor kinase-like 20 isoform 2 [Vitis
           vinifera]
          Length = 609

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/134 (65%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
 Frame = +2

Query: 8   LLFMAVAVLFHDGCTI-TMATTRCQNCGSNMVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 184
           LLF A  +L    C +  MA  RC +CG+  VPYPLSTG DCGDQ YKIRCD+GTLRFD 
Sbjct: 5   LLFTAALLL----CAVCAMAANRCPDCGNTSVPYPLSTGADCGDQEYKIRCDAGTLRFDT 60

Query: 185 VNGTSYTITTINPEIQRFVIHPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 364
           +N +SY+I++I P+IQRFVI P SF  NTCV++D+  +G+QLN SLPFNVTSSNTI+YLN
Sbjct: 61  LN-SSYSISSITPQIQRFVIRPASFAGNTCVTTDLPNQGIQLNESLPFNVTSSNTILYLN 119

Query: 365 CSDTLLRSPLNCTS 406
           C+DTLLRSPLNC+S
Sbjct: 120 CTDTLLRSPLNCSS 133


>emb|CBI31617.3| unnamed protein product [Vitis vinifera]
          Length = 690

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/134 (65%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
 Frame = +2

Query: 8   LLFMAVAVLFHDGCTI-TMATTRCQNCGSNMVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 184
           LLF A  +L    C +  MA  RC +CG+  VPYPLSTG DCGDQ YKIRCD+GTLRFD 
Sbjct: 5   LLFTAALLL----CAVCAMAANRCPDCGNTSVPYPLSTGADCGDQEYKIRCDAGTLRFDT 60

Query: 185 VNGTSYTITTINPEIQRFVIHPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 364
           +N +SY+I++I P+IQRFVI P SF  NTCV++D+  +G+QLN SLPFNVTSSNTI+YLN
Sbjct: 61  LN-SSYSISSITPQIQRFVIRPASFAGNTCVTTDLPNQGIQLNESLPFNVTSSNTILYLN 119

Query: 365 CSDTLLRSPLNCTS 406
           C+DTLLRSPLNC+S
Sbjct: 120 CTDTLLRSPLNCSS 133


>ref|XP_002282445.1| PREDICTED: wall-associated receptor kinase-like 20 isoform 1 [Vitis
           vinifera]
          Length = 629

 Score =  182 bits (463), Expect = 2e-44
 Identities = 88/134 (65%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
 Frame = +2

Query: 8   LLFMAVAVLFHDGCTI-TMATTRCQNCGSNMVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 184
           LLF A  +L    C +  MA  RC +CG+  VPYPLSTG DCGDQ YKIRCD+GTLRFD 
Sbjct: 5   LLFTAALLL----CAVCAMAANRCPDCGNTSVPYPLSTGADCGDQEYKIRCDAGTLRFDT 60

Query: 185 VNGTSYTITTINPEIQRFVIHPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 364
           +N +SY+I++I P+IQRFVI P SF  NTCV++D+  +G+QLN SLPFNVTSSNTI+YLN
Sbjct: 61  LN-SSYSISSITPQIQRFVIRPASFAGNTCVTTDLPNQGIQLNESLPFNVTSSNTILYLN 119

Query: 365 CSDTLLRSPLNCTS 406
           C+DTLLRSPLNC+S
Sbjct: 120 CTDTLLRSPLNCSS 133


>dbj|BAF45465.1| hypothetical protein [Nicotiana tabacum]
          Length = 630

 Score =  169 bits (427), Expect = 3e-40
 Identities = 81/132 (61%), Positives = 98/132 (74%)
 Frame = +2

Query: 11  LFMAVAVLFHDGCTITMATTRCQNCGSNMVPYPLSTGPDCGDQSYKIRCDSGTLRFDAVN 190
           +F A  +L        ++  RC +CGS+ VPYPLSTGPDCGDQSYKIRC S  L FD +N
Sbjct: 8   IFTAALLLLMCAAAPALSARRCADCGSSPVPYPLSTGPDCGDQSYKIRCTSTQLLFDTLN 67

Query: 191 GTSYTITTINPEIQRFVIHPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLNCS 370
             SY IT+I+PE QR  I P  F+ NTC++ DI T G+QLNSSLPFN+TSSNTI+YLNCS
Sbjct: 68  N-SYPITSISPETQRLTIQPSPFLPNTCITQDISTIGVQLNSSLPFNITSSNTIVYLNCS 126

Query: 371 DTLLRSPLNCTS 406
           +TLL SPLNC+S
Sbjct: 127 ETLLTSPLNCSS 138


>emb|CAN68735.1| hypothetical protein VITISV_037016 [Vitis vinifera]
          Length = 254

 Score =  164 bits (416), Expect = 5e-39
 Identities = 80/134 (59%), Positives = 101/134 (75%), Gaps = 1/134 (0%)
 Frame = +2

Query: 8   LLFMAVAVLFHDGCTI-TMATTRCQNCGSNMVPYPLSTGPDCGDQSYKIRCDSGTLRFDA 184
           LLF A  +L    C +  M+  RC +CG+  VPYPLSTG DCGDQ YKIRCD G L FD+
Sbjct: 5   LLFTAALLL----CAVCAMSANRCPDCGTTPVPYPLSTGADCGDQEYKIRCDEGKLIFDS 60

Query: 185 VNGTSYTITTINPEIQRFVIHPPSFVSNTCVSSDIRTEGLQLNSSLPFNVTSSNTIMYLN 364
           VN +SY+I  I+PE QR VI P SF  +TC+++D   +G+QLN+SLPFNVTSSNTIM+LN
Sbjct: 61  VN-SSYSIAFISPETQRLVIRPASFAGDTCITTDFPKQGIQLNNSLPFNVTSSNTIMFLN 119

Query: 365 CSDTLLRSPLNCTS 406
           C+++L RSPLNC+S
Sbjct: 120 CTESLFRSPLNCSS 133


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