BLASTX nr result

ID: Coptis23_contig00029950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029950
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528173.1| Disease resistance protein RFL1, putative [R...    57   1e-06
ref|XP_002278676.2| PREDICTED: probable disease resistance prote...    57   2e-06

>ref|XP_002528173.1| Disease resistance protein RFL1, putative [Ricinus communis]
           gi|223532385|gb|EEF34180.1| Disease resistance protein
           RFL1, putative [Ricinus communis]
          Length = 881

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/51 (45%), Positives = 34/51 (66%)
 Frame = +1

Query: 88  LCKSALHFPSIK*MKSYKCLSLRRLPLQSDSCQNRLQFIGGDPDWWNNLEW 240
           +C+ AL FPS++ +  Y+C  LR+LP  SDS +  L+ I G  +WWN L+W
Sbjct: 814 ICRQALSFPSLEKITVYECPRLRKLPFNSDSARTSLKEIRGKENWWNGLQW 864


>ref|XP_002278676.2| PREDICTED: probable disease resistance protein At5g63020-like
           [Vitis vinifera]
          Length = 895

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 5/66 (7%)
 Frame = +1

Query: 58  QVQG*KLHFC-----LCKSALHFPSIK*MKSYKCLSLRRLPLQSDSCQNRLQFIGGDPDW 222
           +++G  LH+      + + AL FPS+K ++  KC +LR+LPL S+S +N L+ I G  +W
Sbjct: 798 RLEGLTLHYLPNLRSISRRALPFPSLKTLRVTKCPNLRKLPLDSNSARNSLKIIEGTSEW 857

Query: 223 WNNLEW 240
           W  L+W
Sbjct: 858 WRGLQW 863


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