BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029901
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAZ04048.1| photosystem II protein I [Ranunculus macranthus]        81   1e-13
ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum]       76   2e-12
gb|AFA27632.1| photosystem II protein I, partial [Cyperus altern...    74   2e-11
ref|XP_003605606.1| Photosystem II reaction center protein K [Me...    74   2e-11
ref|XP_003620833.1| Photosystem II reaction center protein K [Me...    73   2e-11

>gb|AAZ04048.1| photosystem II protein I [Ranunculus macranthus]
          Length = 53

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/46 (86%), Positives = 42/46 (91%)
 Frame = -3

Query: 139 IIYSLFYQK*SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 2
           +IYSLF +   YLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG
Sbjct: 1   MIYSLFTKNDLYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 46


>ref|YP_002720022.1| photosystem II protein I [Nicotiana tabacum]
          Length = 51

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 38/45 (84%), Positives = 43/45 (95%)
 Frame = -3

Query: 136 IYSLFYQK*SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 2
           +YSLF++K ++LGD VMLTLKLFVYTVVIFFVSLFIFGFLSNDPG
Sbjct: 1   MYSLFFKK-NHLGDCVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 44


>gb|AFA27632.1| photosystem II protein I, partial [Cyperus alternifolius]
          Length = 52

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = -3

Query: 139 IIYSLFYQK*SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 2
           +IYSL  +K   LGDF+MLTLKLFVYTVVIFFVSLFIFGFLSNDPG
Sbjct: 1   VIYSLKNKK-KDLGDFIMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 45


>ref|XP_003605606.1| Photosystem II reaction center protein K [Medicago truncatula]
           gi|355506661|gb|AES87803.1| Photosystem II reaction
           center protein K [Medicago truncatula]
          Length = 144

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/36 (94%), Positives = 36/36 (100%)
 Frame = -3

Query: 109 SYLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 2
           +YLGDFVMLTLKLFVYT+VIFFVSLFIFGFLSNDPG
Sbjct: 102 NYLGDFVMLTLKLFVYTIVIFFVSLFIFGFLSNDPG 137


>ref|XP_003620833.1| Photosystem II reaction center protein K [Medicago truncatula]
           gi|355495848|gb|AES77051.1| Photosystem II reaction
           center protein K [Medicago truncatula]
          Length = 112

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/35 (97%), Positives = 35/35 (100%)
 Frame = -3

Query: 106 YLGDFVMLTLKLFVYTVVIFFVSLFIFGFLSNDPG 2
           YLGDFVMLTLKLFVYT+VIFFVSLFIFGFLSNDPG
Sbjct: 71  YLGDFVMLTLKLFVYTIVIFFVSLFIFGFLSNDPG 105