BLASTX nr result

ID: Coptis23_contig00029896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029896
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253...    67   1e-09
gb|ACU20899.1| unknown [Glycine max]                                   66   3e-09
ref|XP_002515298.1| conserved hypothetical protein [Ricinus comm...    64   1e-08
ref|XP_003554545.1| PREDICTED: uncharacterized protein LOC100810...    63   3e-08
ref|XP_002308239.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002275699.1| PREDICTED: uncharacterized protein LOC100253802 [Vitis vinifera]
          Length = 163

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 45/116 (38%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
 Frame = -2

Query: 510 IVCPVEELRKTRVVWALRADEELQAGKYYLMFPAKKVYSKVSETEMKLIDTACRKKG-KT 334
           +V  V++LR+TR + A+RAD+ L  GK YLM P  +V+  VSE EM LI  A +K+  K 
Sbjct: 47  VVSRVDDLRRTRRIPAMRADDVLLEGKAYLMMPVSRVHCVVSEVEMALIAAASKKRSKKR 106

Query: 333 VGPKVFPXXXXXXXXXXXXXEDY-------DTG-FPNCKLGNCKQWRPMLEPIYEG 190
            G +V P                       D G F   +LGN +QW P+LE I EG
Sbjct: 107 GGSRVLPAGNEGTTENLEVQSRVLGSDGGGDVGFFGRHRLGNFRQWSPVLETISEG 162


>gb|ACU20899.1| unknown [Glycine max]
          Length = 171

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 4/110 (3%)
 Frame = -2

Query: 510 IVCPVEELRKTRVVWALRADEELQAGKYYLMFPAKKVYSKVSETEMKLIDTA---CRKKG 340
           +V PV+E+R+T  V AL ADEEL AGK YL+ P  ++ SK SE EM + +      + K 
Sbjct: 62  VVTPVDEIRRTGRVSALLADEELVAGKVYLLLPVNRINSKASEFEMAIAEKQSGHTKSKR 121

Query: 339 KTVGPKVFPXXXXXXXXXXXXXEDYDTGFPNC-KLGNCKQWRPMLEPIYE 193
             +  KV P             +   + FP C + GN  +W P+L+PI E
Sbjct: 122 GNIMAKVSPSLISRSNERDEENQVTVSVFPVCPRFGNQVRWNPVLDPIVE 171


>ref|XP_002515298.1| conserved hypothetical protein [Ricinus communis]
           gi|223545778|gb|EEF47282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
 Frame = -2

Query: 510 IVCPVEELRKTRVVWALRADEELQAGKYYLMFPAKKVYSKVSETEMKLIDTAC------- 352
           +V    EL +T  V ALRA++E+ A K YL  P  +V  K+SE+EM++I  A        
Sbjct: 47  VVSAAHELLRTGRVIALRAEDEVLARKVYLSLPLCRVNRKISESEMRIIQCAVAVEKMSP 106

Query: 351 -RKKGKTVGP----KVFPXXXXXXXXXXXXXEDYDTGFPNCKLGNCKQWRPMLEPIYE 193
            +K G  V P    +V               E+ DT F  C+L N ++W P+LEPI+E
Sbjct: 107 KKKSGAKVLPAVAVEVKEEEEEIESEVVGVLEEQDTDFSGCRLANYQRWTPVLEPIFE 164


>ref|XP_003554545.1| PREDICTED: uncharacterized protein LOC100810032 [Glycine max]
          Length = 146

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 7/113 (6%)
 Frame = -2

Query: 510 IVCPVEELRKTRVVWALRADEELQAGKYYLMFPAKKVYSKVSETEMKLIDTACRKKGKT- 334
           ++ PV+ELR+T  V AL ADEEL AGK YL+ P  +V SK SE EM L +       +T 
Sbjct: 57  VITPVDELRRTGRVSALLADEELVAGKVYLLLPVNRVNSKASEFEMALAEKQSGHTKRTR 116

Query: 333 ------VGPKVFPXXXXXXXXXXXXXEDYDTGFPNCKLGNCKQWRPMLEPIYE 193
                 V P V P                       + GN  +W P+L+PI+E
Sbjct: 117 GNNMAKVSPSVCP-----------------------RFGNQVRWNPVLDPIFE 146


>ref|XP_002308239.1| predicted protein [Populus trichocarpa] gi|222854215|gb|EEE91762.1|
           predicted protein [Populus trichocarpa]
          Length = 167

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 11/117 (9%)
 Frame = -2

Query: 510 IVCPVEELRKTRVVWALRADEELQAGKYYLMFPAKKVYSKVSETEMKLIDT---ACRKKG 340
           ++ PV+EL++     A+RAD+EL  GK YL  P  K   K+S +E+ +I++   AC K+ 
Sbjct: 49  VIAPVDELKQRSRTIAMRADDELLPGKVYLSVPLSKANCKISASELAIIESTIAACAKRS 108

Query: 339 --KTVGPKVFPXXXXXXXXXXXXXEDY------DTGFPNCKLGNCKQWRPMLEPIYE 193
             K  G KV P                      DT   + +L N +QW   LEPI E
Sbjct: 109 SKKRSGAKVLPAMAVDLWEEKGSESGVKVLEGNDTSSTSYRLVNYRQWTLALEPIPE 165


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