BLASTX nr result

ID: Coptis23_contig00029886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00029886
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517011.1| phosphatidylcholine transfer protein, putati...    57   2e-06
emb|CBI26372.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263...    56   3e-06
ref|XP_002312574.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06

>ref|XP_002517011.1| phosphatidylcholine transfer protein, putative [Ricinus communis]
           gi|223543646|gb|EEF45174.1| phosphatidylcholine transfer
           protein, putative [Ricinus communis]
          Length = 442

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/28 (78%), Positives = 26/28 (92%)
 Frame = -1

Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407
           W+W+VVGGTVALVCGLH+G +GK LLFG
Sbjct: 407 WKWIVVGGTVALVCGLHSGAVGKALLFG 434


>emb|CBI26372.3| unnamed protein product [Vitis vinifera]
          Length = 404

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -1

Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407
           W+W+V+GGTVALVCGLHTG IGK LL G
Sbjct: 369 WKWIVIGGTVALVCGLHTGTIGKALLIG 396


>ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis
           vinifera]
          Length = 429

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -1

Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407
           W+W+V+GGTVALVCGLHTG IGK LL G
Sbjct: 394 WKWIVIGGTVALVCGLHTGTIGKALLIG 421


>ref|XP_002312574.1| predicted protein [Populus trichocarpa] gi|222852394|gb|EEE89941.1|
           predicted protein [Populus trichocarpa]
          Length = 440

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -1

Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407
           W+W+ VGGTVALVCGLHTG IGK LL G
Sbjct: 405 WKWIAVGGTVALVCGLHTGAIGKALLLG 432


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