BLASTX nr result
ID: Coptis23_contig00029886
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00029886 (490 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002517011.1| phosphatidylcholine transfer protein, putati... 57 2e-06 emb|CBI26372.3| unnamed protein product [Vitis vinifera] 56 3e-06 ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263... 56 3e-06 ref|XP_002312574.1| predicted protein [Populus trichocarpa] gi|2... 55 6e-06 >ref|XP_002517011.1| phosphatidylcholine transfer protein, putative [Ricinus communis] gi|223543646|gb|EEF45174.1| phosphatidylcholine transfer protein, putative [Ricinus communis] Length = 442 Score = 57.0 bits (136), Expect = 2e-06 Identities = 22/28 (78%), Positives = 26/28 (92%) Frame = -1 Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407 W+W+VVGGTVALVCGLH+G +GK LLFG Sbjct: 407 WKWIVVGGTVALVCGLHSGAVGKALLFG 434 >emb|CBI26372.3| unnamed protein product [Vitis vinifera] Length = 404 Score = 56.2 bits (134), Expect = 3e-06 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = -1 Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407 W+W+V+GGTVALVCGLHTG IGK LL G Sbjct: 369 WKWIVIGGTVALVCGLHTGTIGKALLIG 396 >ref|XP_002284351.1| PREDICTED: uncharacterized protein LOC100263172 isoform 2 [Vitis vinifera] Length = 429 Score = 56.2 bits (134), Expect = 3e-06 Identities = 22/28 (78%), Positives = 25/28 (89%) Frame = -1 Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407 W+W+V+GGTVALVCGLHTG IGK LL G Sbjct: 394 WKWIVIGGTVALVCGLHTGTIGKALLIG 421 >ref|XP_002312574.1| predicted protein [Populus trichocarpa] gi|222852394|gb|EEE89941.1| predicted protein [Populus trichocarpa] Length = 440 Score = 55.1 bits (131), Expect = 6e-06 Identities = 22/28 (78%), Positives = 24/28 (85%) Frame = -1 Query: 490 WRWVVVGGTVALVCGLHTGVIGKTLLFG 407 W+W+ VGGTVALVCGLHTG IGK LL G Sbjct: 405 WKWIAVGGTVALVCGLHTGAIGKALLLG 432